Interlocking G-Quadruplexes Using a G-Triad•G Connection: Implications for G-Wire Assembly

J Am Chem Soc. 2024 Sep 25;146(38):26034-26040. doi: 10.1021/jacs.4c05713. Epub 2024 Sep 14.

Abstract

G-quadruplexes are noncanonical structures of nucleic acids formed mainly by G-rich sequences and play crucial roles in important cellular processes. They are also increasingly used in nanotechnology for their valuable properties. Various unexpected structures of G-quadruplexes have been solved recently, including a stable G-quadruplex lacking one guanine in the G-tetrad core, harboring a vacant site. In this study, we demonstrate the interlocking of two intramolecular G-quadruplexes: one containing a vacant site (4n - 1) and the other with an unbound guanine (4n + 1). These G-quadruplexes interact through a G-triad-G connection with unprecedented 5'-3' stacking. Using these interconnection properties, we have identified a sequence capable of self-assembling into G-wires in K+ solutions with potential nanotechnological applications.

MeSH terms

  • DNA / chemistry
  • G-Quadruplexes*
  • Guanine* / chemistry
  • Models, Molecular

Substances

  • Guanine
  • DNA