Transient splicing inhibition causes persistent DNA damage and chemotherapy vulnerability in triple-negative breast cancer

Cell Rep. 2024 Sep 24;43(9):114751. doi: 10.1016/j.celrep.2024.114751. Epub 2024 Sep 13.

Abstract

Triple negative breast cancer (TNBC) is an aggressive type of breast cancer. While most TNBCs are initially sensitive to chemotherapy, a substantial fraction acquires resistance to treatments and progresses to more advanced stages. Here, we identify the spliceosome U2 small nuclear ribonucleoprotein particle (snRNP) complex as a modulator of chemotherapy efficacy in TNBC. Transient U2 snRNP inhibition induces persistent DNA damage in TNBC cells and organoids, regardless of their homologous recombination proficiency. U2 snRNP inhibition pervasively deregulates genes involved in the DNA damage response (DDR), an effect relying on their genomic structure characterized by a high number of small exons. Furthermore, a pulse of splicing inhibition elicits long-lasting repression of DDR proteins and enhances the cytotoxic effect of platinum-based drugs and poly(ADP-ribose) polymerase inhibitors (PARPis) in multiple TNBC models. These findings identify the U2 snRNP as an actionable target that can be exploited to enhance chemotherapy efficacy in TNBCs.

Keywords: CP: Cancer; DNA damage; combined treatment; homologous recombination; pladienolide B; splicing inhibitors; targeted therapy; triple negative breast cancer.

MeSH terms

  • Animals
  • Antineoplastic Agents / pharmacology
  • Antineoplastic Agents / therapeutic use
  • Cell Line, Tumor
  • DNA Damage*
  • Female
  • Humans
  • Mice
  • Poly(ADP-ribose) Polymerase Inhibitors / pharmacology
  • RNA Splicing* / drug effects
  • RNA Splicing* / genetics
  • Spliceosomes / drug effects
  • Spliceosomes / metabolism
  • Triple Negative Breast Neoplasms* / drug therapy
  • Triple Negative Breast Neoplasms* / genetics
  • Triple Negative Breast Neoplasms* / metabolism
  • Triple Negative Breast Neoplasms* / pathology

Substances

  • Poly(ADP-ribose) Polymerase Inhibitors
  • Antineoplastic Agents