Molecular Characterization of the MoxR AAA+ ATPase of Synechococcus sp. Strain NKBG15041c

Int J Mol Sci. 2024 Sep 15;25(18):9955. doi: 10.3390/ijms25189955.

Abstract

We isolated a stress-tolerance-related gene from a genome library of Synechococcus sp. NKBG15041c. The expression of the gene in E. coli confers resistance against various stresses. The gene encodes a MoxR AAA+ ATPase, which was designated SyMRP since it belongs to the MRP subfamily. The recombinant SyMRP showed weak ATPase activity and protected citrate synthase from thermal aggregation. Interestingly, the chaperone activity of SyMRP is ATP-dependent. SyMRP exists as a stable hexamer, and ATP-dependent conformation changes were not detected via analytical ultracentrifugation (AUC) or small-angle X-ray scattering (SAXS). Although the hexameric structure predicted by AlphaFold 3 was the canonical flat-ring structure, the structures observed by atomic force microscopy (AFM) and transmission electron microscopy (TEM) were not the canonical ring structure. In addition, the experimental SAXS profiles did not show a peak that should exist in the symmetric-ring structure. Therefore, SyMRP seems to form a hexameric structure different from the canonical hexameric structure of AAA+ ATPase.

Keywords: MoxR; analytical ultracentrifugation; chaperone; cyanobacteria; stress.

MeSH terms

  • Adenosine Triphosphatases* / chemistry
  • Adenosine Triphosphatases* / genetics
  • Adenosine Triphosphatases* / metabolism
  • Adenosine Triphosphate / metabolism
  • Bacterial Proteins* / chemistry
  • Bacterial Proteins* / genetics
  • Bacterial Proteins* / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Microscopy, Atomic Force
  • Scattering, Small Angle
  • Synechococcus* / enzymology
  • Synechococcus* / genetics
  • X-Ray Diffraction

Substances

  • Adenosine Triphosphatases
  • Bacterial Proteins
  • Adenosine Triphosphate