Photochemically Triggered and Autonomous Oscillatory pH-Modulated Transient Assembly/Disassembly of DNA Microdroplet Coacervates

Angew Chem Int Ed Engl. 2025 Jan 15;64(3):e202415550. doi: 10.1002/anie.202415550. Epub 2024 Nov 9.

Abstract

The assembly of pH-responsive DNA-based, phase-separated microdroplets (MDs) coacervates, consisting of frameworks composed of Y-shaped nucleic acid modules crosslinked by pH-responsive strands, is introduced. The phase-separated MDs reveal dynamic pH-stimulated switchable or oscillatory transient depletion and reformation. In one system, a photoisomerizable merocyanine/spiropyran photoacid is used for the light-induced pH switchable modulation of the reaction medium between the values pH=6.0-4.4. The dynamic transient photochemically-induced switchable depletion/reformation of phase-separated MDs, follows the rhythm of pH changes in solution. In a second system, the Landolt oscillatory reaction mixture pH 7.5→4.2→7.5 is applied to stimulate the oscillatory depletion/reformation of the MDs. The autonomous dynamic oscillation of the assembly/disassembly of the MDs follows the oscillating pH rhythm of the reaction medium.

Keywords: DNA nanotechnology; DNA structures; Dissipative process; Liquid-liquid phase separation; Self-assembly.

MeSH terms

  • Benzopyrans
  • DNA* / chemistry
  • Hydrogen-Ion Concentration
  • Indoles / chemistry
  • Nitro Compounds / chemistry
  • Photochemical Processes*

Substances

  • DNA
  • Indoles
  • spiropyran
  • merocyanine
  • Nitro Compounds
  • Benzopyrans