Innate immune control of influenza virus interspecies adaptation via IFITM3

Nat Commun. 2024 Oct 30;15(1):9375. doi: 10.1038/s41467-024-53792-3.

Abstract

Influenza virus pandemics are caused by viruses from animal reservoirs that adapt to efficiently infect and replicate in human hosts. Here, we investigate whether Interferon-Induced Transmembrane Protein 3 (IFITM3), a host antiviral factor with known human deficiencies, plays a role in interspecies virus infection and adaptation. We find that IFITM3-deficient mice and human cells can be infected with low doses of avian influenza viruses that fail to infect WT counterparts, identifying a new role for IFITM3 in controlling the minimum infectious virus dose threshold. Remarkably, influenza viruses passaged through Ifitm3-/- mice exhibit enhanced host adaptation, a result that is distinct from viruses passaged in mice deficient for interferon signaling, which exhibit attenuation. Our data demonstrate that IFITM3 deficiency uniquely facilitates potentially zoonotic influenza virus infections and subsequent adaptation, implicating IFITM3 deficiencies in the human population as a vulnerability for emergence of new pandemic viruses.

MeSH terms

  • Adaptation, Physiological / immunology
  • Animals
  • Dogs
  • HEK293 Cells
  • Humans
  • Immunity, Innate*
  • Influenza A virus / immunology
  • Influenza A virus / physiology
  • Influenza, Human / immunology
  • Influenza, Human / virology
  • Madin Darby Canine Kidney Cells
  • Membrane Proteins* / genetics
  • Membrane Proteins* / metabolism
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Orthomyxoviridae Infections / immunology
  • Orthomyxoviridae Infections / virology
  • RNA-Binding Proteins* / genetics
  • RNA-Binding Proteins* / metabolism
  • Virus Replication

Substances

  • fragilis protein, mouse
  • IFITM3 protein, human
  • Membrane Proteins
  • RNA-Binding Proteins