Drug repurposing against fucosyltransferase-2 via docking, STD-NMR, and molecular dynamic simulation studies

PLoS One. 2024 Nov 1;19(11):e0308517. doi: 10.1371/journal.pone.0308517. eCollection 2024.

Abstract

Aberrant fucosylation is the hallmark of malignant cell transformation, leading to many cellular events, such as uncontrolled cell proliferation, angiogenesis, tumor cell invasion, and metastasis. This increased fucosylation is caused due to the over-expression of fucosyltransferases (FUTs) that catalyzes the transfer of the fucose (Fuc) residue from GDP-fucose (donor substrate) to various oligosaccharides, glycoproteins, and glycolipids (acceptor substrates). Hence, fucosyltransferases (FUTs) are considered as validated target for the drug discovery against on cancers. In the current study, a drug repurposing approach was deployed to identify new hits against fucosyltransferase 2 (FUT2), using computational and biophysical techniques. A library of 500 US-FDA approved drugs were screened in-silico against fucosyltransferase 2 (FUT2) donor and acceptor sites. Five drugs were predicted as hits, based on their significant docking scores (-5.8 to -8.2), and binding energies (-43 to -51.19 Kcal/mol). Furthermore, STD-NMR highlighted the epitope of these drugs in the binding site of fucosyltransferase 2 (FUT2). Simulation studies provided insights about the binding site of these drugs, and 4 of them, acarbose, ascorbic acid, ibuprofen, and enalaprilat dihydrate, were found as significant binders at the donor binding site of fucosyltransferase 2 (FUT2). Hence, the current study reports the repurposed drugs as potential hits against fucosyltransferase 2 (FUT2). These may be further studied through in-vitro and in-vivo inhibitory and mechanistic studies.

MeSH terms

  • Drug Repositioning*
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology
  • Fucosyltransferases* / chemistry
  • Fucosyltransferases* / metabolism
  • Galactoside 2-alpha-L-fucosyltransferase*
  • Humans
  • Magnetic Resonance Spectroscopy
  • Molecular Docking Simulation*
  • Molecular Dynamics Simulation*
  • Protein Binding

Substances

  • Fucosyltransferases
  • Galactoside 2-alpha-L-fucosyltransferase
  • Enzyme Inhibitors

Grants and funding

The Higher Education Commission (HEC), Pakistan, supported the study under the National Research Program for Universities (NRPU Project No. 17598 to H.Z.).