Nutrient control of growth and metabolism through mTORC1 regulation of mRNA splicing

Mol Cell. 2024 Dec 5;84(23):4558-4575.e8. doi: 10.1016/j.molcel.2024.10.037. Epub 2024 Nov 20.

Abstract

Cellular growth and organismal development are remarkably complex processes that require the nutrient-responsive kinase mechanistic target of rapamycin complex 1 (mTORC1). Anticipating that important mTORC1 functions remained to be identified, we employed genetic and bioinformatic screening in C. elegans to uncover mechanisms of mTORC1 action. Here, we show that during larval growth, nutrients induce an extensive reprogramming of gene expression and alternative mRNA splicing by acting through mTORC1. mTORC1 regulates mRNA splicing and the production of protein-coding mRNA isoforms largely independently of its target p70 S6 kinase (S6K) by increasing the activity of the serine/arginine-rich (SR) protein RSP-6 (SRSF3/7) and other splicing factors. mTORC1-mediated mRNA splicing regulation is critical for growth; mediates nutrient control of mechanisms that include energy, nucleotide, amino acid, and other metabolic pathways; and may be conserved in humans. Although mTORC1 inhibition delays aging, mTORC1-induced mRNA splicing promotes longevity, suggesting that when mTORC1 is inhibited, enhancement of this splicing might provide additional anti-aging benefits.

Keywords: C. elegans; SR proteins; development; gene expression; growth; human cell growth; longevity; mRNA splicing; mTORC1; metabolism; nutrient response.

MeSH terms

  • Alternative Splicing
  • Animals
  • Caenorhabditis elegans Proteins* / genetics
  • Caenorhabditis elegans Proteins* / metabolism
  • Caenorhabditis elegans* / genetics
  • Caenorhabditis elegans* / growth & development
  • Caenorhabditis elegans* / metabolism
  • Humans
  • Longevity / genetics
  • Mechanistic Target of Rapamycin Complex 1* / genetics
  • Mechanistic Target of Rapamycin Complex 1* / metabolism
  • Multiprotein Complexes / genetics
  • Multiprotein Complexes / metabolism
  • Nutrients / metabolism
  • RNA Splicing
  • RNA, Messenger* / genetics
  • RNA, Messenger* / metabolism
  • Ribosomal Protein S6 Kinases, 70-kDa / genetics
  • Ribosomal Protein S6 Kinases, 70-kDa / metabolism
  • Signal Transduction
  • TOR Serine-Threonine Kinases / genetics
  • TOR Serine-Threonine Kinases / metabolism

Substances

  • Mechanistic Target of Rapamycin Complex 1
  • Caenorhabditis elegans Proteins
  • RNA, Messenger
  • TOR Serine-Threonine Kinases
  • Multiprotein Complexes
  • Ribosomal Protein S6 Kinases, 70-kDa