Homologous recombination deficiency in pancreatic neuroendocrine tumors

Future Oncol. 2024 Dec;20(39):3257-3266. doi: 10.1080/14796694.2024.2421160. Epub 2024 Nov 25.

Abstract

Aim: Pancreatic Neuroendocrine tumors (pNETs) are a heterogeneous group of neoplasms whose tumor biology is still little known. Thanks to next-generation sequencing, pathogenic mutations in base-excision-repair MUTYH gene and homologous recombination genes CHEK2 and BRCA2 seem to have a role in the development of pNETs.Research design & methods: We assumed that Homologous Recombination Deficiency (HRD) could be a critical pathogenetic mechanism for pNETs. We evaluated the HR status in a case series of 33 patients diagnosed with pNET at the Modena Cancer Center using the AmoyDX HRD Focus assay.Results: The AmoyDx test did not identify any HRD-positive patients (median GSS equal to 1.1, positive score: >50), and no pathogenic BRCA variants were detected. However, thanks to the SNP analysis, a consistent number of partial or complete single-copy deletions or duplications in several chromosomes.Conclusion: The AmoyDX HRD focus assay performed well on pancreatic samples, despite being originally designed for ovarian cancer and used on samples stored for over a year. Larger studies are needed to further assess the role of HRD assays in pNETs research.

Keywords: BRCA; HRD; International Cancer Genome Consortium; MUTYH; pNET.

Plain language summary

[Box: see text].

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • BRCA2 Protein / genetics
  • Checkpoint Kinase 2 / genetics
  • Female
  • Genetic Predisposition to Disease
  • High-Throughput Nucleotide Sequencing
  • Homologous Recombination*
  • Humans
  • Male
  • Middle Aged
  • Mutation
  • Neuroendocrine Tumors* / genetics
  • Neuroendocrine Tumors* / pathology
  • Pancreatic Neoplasms* / genetics
  • Polymorphism, Single Nucleotide

Substances

  • BRCA2 Protein
  • BRCA2 protein, human
  • Checkpoint Kinase 2
  • CHEK2 protein, human