Immuno-oncologic profiling by stage-dependent transcriptome and proteome analyses of spontaneously regressing canine cutaneous histiocytoma

PeerJ. 2024 Nov 26:12:e18444. doi: 10.7717/peerj.18444. eCollection 2024.

Abstract

Canine cutaneous histiocytoma (CCH) is a tumor that originates from dermal Langerhans cells and affects particularly young dogs. The common spontaneous regression of CCH makes it an interesting model in comparative oncology research. Previous studies have indicated that anti-tumor immune responses may be involved, but details remain speculative to date. Here, we asked which specific immuno-oncological dynamics underlie spontaneous regression of CCH on mRNA and protein levels. QuantSeq 3' mRNA sequencing with functional over-representation analysis and an nCounter RNA hybridization assay were employed on 21 formalin-fixed, paraffin-embedded CCH samples representing three different tumor stages (dataset information: GSE261387-Immuno-Oncologic Profiling by Stage-Dependent Transcriptome and Proteome Analyses of Spontaneously Regressing Canine Cutaneous Histiocytoma-OmicsDI). Nine additional samples were subjected to matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI-MSI). Surprisingly, only minor stage-specific differences were found. When we investigated expression of B7 family ligands and CD28 family receptors holding co-stimulatory and -inhibitory functions, respectively, we found a higher abundance of CD80, CD86, CTLA4 and CD28, which may trigger a balanced activation of lymphocyte-mediated immune responses. CD80 and CD86 expressing cells were further quantified by in situ hybridization and compared with data from three cases of canine histiocytic sarcoma (HS), a malignant tumor variant originating from antigen-presenting interstitial dendritic cells. A stage-specific increase of CD80 expressing cells was recorded in CCH from the tumor bottom to the top, while CD86 was continuously and homogenously expressed at high levels. Overall expression of CD80 in CCH was similar to that in HS (73.3 ± 37.4% vs 62.1 ± 46.4%), while significantly more CD86 expressing tumor cells were found in CCH (94.7 ± 10.3%) when compared to HS (57.6 ± 11.0%). Our data suggest that major immuno-oncological pathways are not regulated during regression of CCH on the mRNA or protein levels as detectable by the methods used. Instead, our data provide further evidence supporting previous hypotheses towards a role of immune stimulatory B7 family ligands and CD28 family receptors in the regression of CCH.

Keywords: 3′ RNA-seq; Canine; Canine IO panel; Canine cutaneous histiocytoma; Co-stimulatory molecules; FFPE; Formalin-fixed; Immuno-oncology; Paraffin-embedded; Pathology; Tumor regression.

MeSH terms

  • Animals
  • Dog Diseases* / genetics
  • Dog Diseases* / immunology
  • Dog Diseases* / metabolism
  • Dog Diseases* / pathology
  • Dogs
  • Gene Expression Profiling / methods
  • Histiocytoma, Benign Fibrous / genetics
  • Histiocytoma, Benign Fibrous / immunology
  • Histiocytoma, Benign Fibrous / metabolism
  • Histiocytoma, Benign Fibrous / pathology
  • Histiocytoma, Benign Fibrous / veterinary
  • Neoplasm Regression, Spontaneous / immunology
  • Neoplasm Staging
  • Proteome* / genetics
  • Proteome* / metabolism
  • Skin Neoplasms* / genetics
  • Skin Neoplasms* / immunology
  • Skin Neoplasms* / metabolism
  • Skin Neoplasms* / pathology
  • Skin Neoplasms* / veterinary
  • Transcriptome*

Substances

  • Proteome

Grants and funding

This study was supported by “Förderlinie TEAMS Mittel zur Förderung der Vernetzung zwischen Wissenschaftler/-innen der Freien Universität Berlin” (TEAMS funding line Funds to promote networking between Scientists at the Freie Universität Berlin). There was no additional external funding received for this study. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.