The ameliorative effect of pioglitazone against colistin-induced nephrotoxicity is mediated by inhibition of NF-κB and restoration of Nrf2 signaling: An integrative bioinformatics prediction-guided in vitro study

PLoS One. 2024 Dec 2;19(12):e0314092. doi: 10.1371/journal.pone.0314092. eCollection 2024.

Abstract

Pioglitazone, an anti-diabetic drug, has been previously shown to ameliorate kidney damage through anti-inflammatory and antioxidant effects. In this study, we employed an integrative bioinformatics approach to study the possible mechanisms involved in the mitigative effect of pioglitazone against colistin-induced nephrotoxicity. Next, we validated the results obtained from the bioinformatics study by pre-treating human kidney-2 (HK-2) cell line with pioglitazone 100 μM for 30 minutes and then treating the cells with colistin sulfate 1200 μM for 24 hours. Inflammatory signaling by cytokines and the nuclear factor erythroid 2 related factor 2 (Nrf2) signaling pathways were predicted to be involved in the ameliorative effect of pioglitazone against colistin-induced nephrotoxicity. The nuclear factor kappa B subunit p65 (NF-κB p65) and Nrf2 were among the predicted transcription factors regulating the hub genes. Moreover, miR-24, miR-16, and miR-21 were identified as potential pathogenic miRNAs regulating the hub genes. In contrast, miR-17, miR-27a, and miR-146a were identified as potential protective miRNAs. The in vitro study indicated that pioglitazone pre-treatment increased cell viability in HK-2 cells exposed to colistin. Pioglitazone pre-treatment reduced the expression of pro-inflammatory cytokine genes (IL6 and TNF). Moreover, pioglitazone reduced the protein expression of NF-κB p65 and increased the protein expression of Nrf2. The protective effect of pioglitazone against colistin-induced toxicity in HK-2 cells is related to its anti-inflammatory and antioxidant activity through modulating NF-κB-mediated inflammatory signaling and Nrf2-mediated antioxidative stress signaling.

MeSH terms

  • Cell Line
  • Cell Survival / drug effects
  • Colistin* / adverse effects
  • Colistin* / pharmacology
  • Colistin* / toxicity
  • Computational Biology* / methods
  • Humans
  • Kidney / drug effects
  • Kidney / metabolism
  • Kidney / pathology
  • MicroRNAs / genetics
  • MicroRNAs / metabolism
  • NF-E2-Related Factor 2* / metabolism
  • NF-kappa B* / metabolism
  • Pioglitazone* / pharmacology
  • Signal Transduction* / drug effects
  • Transcription Factor RelA / metabolism

Substances

  • Pioglitazone
  • NF-E2-Related Factor 2
  • NFE2L2 protein, human
  • Colistin
  • NF-kappa B
  • MicroRNAs
  • Transcription Factor RelA

Grants and funding

The authors extend their appreciation to the Deputyship for Research & Innovation, “Ministry of Education” in Saudi Arabia for funding this research work through the project number (IFK-SUDR_H162)". The funder has provided the needed fund to buy the materials and equipment for this work to be done.