Integrative multi-omics analysis uncovers tumor-immune-gut axis influencing immunotherapy outcomes in ovarian cancer

Nat Commun. 2024 Dec 5;15(1):10609. doi: 10.1038/s41467-024-54565-8.

Abstract

Recurrent ovarian cancer patients, especially those resistant to platinum, lack effective curative treatments. To address this, we conducted a phase 2 clinical trial (NCT02853318) combining pembrolizumab with bevacizumab, to increase T cell infiltration into the tumor, and oral cyclophosphamide, to reduce the number of regulatory T cells. The trial accrued 40 heavily pretreated recurrent ovarian cancer patients. The primary endpoint, progression free survival, was extended to a median of 10.2 months. The secondary endpoints demonstrated an objective response rate of 47.5%, and disease control in 30% of patients for over a year while maintaining a good quality of life. We performed comprehensive molecular, immune, microbiome, and metabolic profiling on samples of trial patients. Here, we show increased T and B cell clusters and distinct microbial patterns with amino acid and lipid metabolism are linked to exceptional clinical responses. This study suggests the immune milieu and host-microbiome can be leveraged to improve antitumor response in future immunotherapy trials.

Publication types

  • Clinical Trial, Phase II

MeSH terms

  • Adult
  • Aged
  • Antibodies, Monoclonal, Humanized* / therapeutic use
  • Antineoplastic Combined Chemotherapy Protocols / therapeutic use
  • Bevacizumab* / therapeutic use
  • Cyclophosphamide / therapeutic use
  • Female
  • Gastrointestinal Microbiome* / drug effects
  • Humans
  • Immunotherapy* / methods
  • Middle Aged
  • Multiomics
  • Neoplasm Recurrence, Local / immunology
  • Ovarian Neoplasms* / drug therapy
  • Ovarian Neoplasms* / immunology
  • Ovarian Neoplasms* / therapy
  • Progression-Free Survival
  • Quality of Life
  • Treatment Outcome

Substances

  • Bevacizumab
  • Antibodies, Monoclonal, Humanized
  • pembrolizumab
  • Cyclophosphamide