Comparative study of two Rift Valley fever virus field strains originating from Mauritania

PLoS Negl Trop Dis. 2024 Dec 9;18(12):e0012728. doi: 10.1371/journal.pntd.0012728. eCollection 2024 Dec.

Abstract

Rift Valley fever (RVF) is one of the major viral arthropod-borne diseases in Africa. In recent decades, RVF virus (RVFV), the causative agent of RVF, has been responsible for multiple outbreaks in West Africa with important consequences on human and animal health. In particular, an outbreak occurred in 2010 after heavy rains in the desertic region of Adrar, Mauritania. It was characterized by the appearance of severe clinical signs among dromedary camels. Another one occurred in 2013-2014 across Senegal and the southern part of Mauritania. In this study, we characterized two RVFV field strains isolated during these two outbreaks. The first strain, MRU25010-30, was isolated from a camel (2010) while the second, MRU2687-3, was isolated from a goat (2013). By deep-sequencing and rapid amplification of cDNA-ends by polymerase chain reaction, we successfully sequenced the complete genome of these two RVFV strains as well as the reference laboratory strain ZH548. Phylogenetic analysis showed that the two field viruses belong to two different RVFV genetic lineages. Moreover, we showed that MRU25010-30 replicates more efficiently in various in vitro cell culture models than MRU2687-3 and ZH548. In vivo, MRU25010-30 caused rapid death of BALB/c mice and proved to be more virulent than MRU2687-3, regardless of the route of inoculation (subcutaneous or intranasal). The virulence of MRU25010-30 is associated with a high viral load in the liver and serum of infected mice, while the death of mice infected with MRU2687-3 and ZH548 correlated with a high viral load in the brain. Altogether, the data presented in this study provide new avenues to unveil the molecular viral determinants that modulate RVFV virulence and replication capacity.

Publication types

  • Comparative Study

MeSH terms

  • Animals
  • Camelus / virology
  • Disease Outbreaks
  • Genome, Viral*
  • Goat Diseases / epidemiology
  • Goat Diseases / virology
  • Goats*
  • Mauritania / epidemiology
  • Mice
  • Mice, Inbred BALB C
  • Phylogeny*
  • Rift Valley Fever* / epidemiology
  • Rift Valley Fever* / transmission
  • Rift Valley Fever* / virology
  • Rift Valley fever virus* / classification
  • Rift Valley fever virus* / genetics
  • Rift Valley fever virus* / isolation & purification
  • Rift Valley fever virus* / pathogenicity
  • Virulence

Grants and funding

This work was funded by a grant from Institut National de la Recherche pour l’agriculture, l’alimentation et l’environnement (INRAE, https://www.inrae.fr/en) GISA metaprogram (FORESEE project) awarded to CCS, FA and MR; and a World Organisation for Animal Health (WOAH, https://www.woah.org/en/home/) twinning project ISRA/CIRAD on RVF (2019-2023) awarded to AP, MML and CCS. MC Ph.D fellowship was co-financed by INRAE and Centre de coopération internationale en recherche agronomique pour le développement (CIRAD, https://www.cirad.fr/en). The funders did not play a role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript.