Complete chloroplast genome sequence of the medicinal plant Oxyceros horridus (Rubiaceae) and phylogenetic analysis

Mitochondrial DNA B Resour. 2024 Dec 8;9(12):1658-1663. doi: 10.1080/23802359.2024.2438281. eCollection 2024.

Abstract

Oxyceros horridus Lour. 1790, valued for ornamental and medicinal properties, has been extensively utilized in traditional medicinal in Vietnam. This study assembled and characterized the first chloroplast of Oxyceros horridus, consisted of 155,333 bp with a GC content of 37.5%. The genome included 130 annotated genes (including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes), exhibited a typical quadripartite structure consistent with those found in other members of the Rubiaceae family. Phylogenetic analysis placed O. horridus in Ixoroideae subfamily, closely related to Fosergia shweliensis and Gardenia tenophylla. This study enriches cp genome data and phylogenetic insights within Rubiaceae.

Keywords: Găng gai cong; Oxyceros horridus; Rubiaceae; genome assembly; plastome.

Grants and funding

Minh Trong Quang was funded by the Master, PhD Scholarship Program of Vingroup Innovation Foundation, code VINIF.2021.ThS.69 and VINIF.2022.ThS.054. The funders had no role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript.