Complete genome sequence of Corynebacterium sp. SCR221107, encoding biosynthesis of vitamin B12 isolated from the rumen fluid of Holstein dairy cows

J Anim Sci Technol. 2024 Nov;66(6):1291-1295. doi: 10.5187/jast.2024.e74. Epub 2024 Nov 30.

Abstract

Corynebacterium sp. SCR221107 was isolated from the rumen fluid of healthy male Holstein dairy cows from a research farm at Suncheon, Jeollanam-do, Korea. Corynebacterium sp. SCR221107 is a functional probiotic candidate that produces vitamin B12. All Corynebacterium sp. SCR221107 was sequenced using the PacBio RS II and Illumina HiSeq platforms and assembled de novo. The complete genome sequence of Corynebacterium sp. SCR221107 contained one circular chromosome (3,043,024 bp) with a guanine + cytosine (GC) content of 60.1%. Annotation analysis showed the presence of 2,639 protein-coding sequences, 15 rRNA genes, and 57 tRNA genes. Genome analysis found that Corynebacterium sp. SCR221107 encodes various genes associated with vitamin B12 synthesis and transport. The genomic information provided a detailed understanding of Corynebacterium sp. SCR221107, suggesting that this isolate may have potential probiotic applications.

Keywords: Corynebacterium sp.; De novo assembly; Holstein dairy cow; Whole genome sequencing.