Interferon-Dependent Expression of the Human STAT1 Gene Requires a Distal Regulatory Region Located Approximately 6 kb Upstream for Its Autoregulatory System

Genes Cells. 2025 Jan;30(1):e13188. doi: 10.1111/gtc.13188.

Abstract

We previously suggested that the signal transducer and activator of transcription 1 (STAT1) gene is autoregulated in an interferon (IFN)-dependent manner via a distal regulatory region approximately 5.5-6.2 kb upstream of the murine and human STAT1 promoters (designated 5.5URR). Here, we examined whether this IFN-dependent positive feedback mechanism of the STAT1 gene actually functions in cells. First, we created human embryonic kidney 293 cell mutants lacking the IFN-responsive transcription factor binding sites (IFN-stimulated response element and IFN-gamma-activated sequence) within the 5.5URR and stimulated them with IFN-α/γ. The mutants showed a loss of response to IFN, indicating that the 5.5URR is essential for IFN-induced transcriptional enhancement in STAT1 gene expression. Second, we cloned the full-length 11 kb human STAT1 promoter, including the region upstream of the 5.5URR, from the start codon and linked it to a luciferase gene. Reporter assays showed that IFN-α/γ significantly activated the STAT1 promoter via the 5.5URR. Furthermore, recombinant DNA linking the full-length STAT1 promoter to STAT1 cDNA was introduced into STAT1-deficient cells. In vitro reconstitution experiments showed that IFN-α/γ stimulation increased STAT1 protein levels via the 5.5URR. These results demonstrate that the 5.5URR confers IFN-dependent autoregulation of the STAT1 promoter.

Keywords: STAT1; autoregulation; enhancer; interferon.

MeSH terms

  • Binding Sites
  • Gene Expression Regulation
  • HEK293 Cells
  • Humans
  • Interferon-alpha / genetics
  • Interferon-alpha / metabolism
  • Interferon-alpha / pharmacology
  • Interferon-gamma / metabolism
  • Interferon-gamma / pharmacology
  • Interferons / genetics
  • Interferons / metabolism
  • Promoter Regions, Genetic*
  • Regulatory Sequences, Nucleic Acid
  • Response Elements
  • STAT1 Transcription Factor* / genetics
  • STAT1 Transcription Factor* / metabolism

Substances

  • STAT1 Transcription Factor
  • STAT1 protein, human
  • Interferon-alpha
  • Interferon-gamma
  • Interferons