Substrate expansion of Geotrichum candidum alcohol dehydrogenase towards diaryl ketones by mutation

Appl Microbiol Biotechnol. 2024 Dec 27;108(1):545. doi: 10.1007/s00253-024-13375-0.

Abstract

Chiral diaryl alcohols, such as (4-chlorophenyl)(pyridin-2-yl)methanol, are important intermediates for pharmaceutical synthesis. However, using alcohol dehydrogenases (ADHs) in the asymmetric reduction of diaryl ketones to produce the corresponding alcohols is challenging due to steric hindrance in the substrate binding pockets of the enzymes. In this study, the steric hindrance of the ADH from Geotrichum candidum NBRC 4597 (G. candidum acetophenone reductase, GcAPRD) was eliminated by simultaneous site-directed mutagenesis of Phe56 (in the large pocket) and Trp288 (in the small pocket). As a result, two double mutants, Phe56Ile/Trp288Ala, and Phe56Ala/Trp288Ala, exhibited much higher specific activities towards 2-(4'-chlorobenzoyl)pyridine (4.5 μmol/min/mg and 3.4 μmol/min/mg, respectively) than the wild type (< 0.2 μmol/min/mg). In whole-cell-catalyzed asymmetric reductions of diaryl ketones, Phe56Ile/Trp288Ala significantly increased the isolated yields, which were over 90% for the reactions of most of the tested substrates. Regarding enantioselectivity, Phe56Ile/Trp288Ala and Phe56Ala/Trp288Ala, and Trp288Ala generally exhibited similar selectivity to produce (R)-alcohols with up to 97% ee. KEY POINTS: • Phe56 in Geotrichum reductase (GcAPRD) was mutated to eliminate steric hindrance. • Mutation at Phe56 increased enzymatic activity and expanded substrate specificity. • Phe56Ile/Trp288Ala showed high activity and (R)-selectivity towards diaryl ketones.

Keywords: Alcohol dehydrogenase; Asymmetric reduction; Chiral diaryl alcohol; Diaryl ketone; Enzyme engineering; Site-directed mutagenesis.

MeSH terms

  • Alcohol Dehydrogenase* / chemistry
  • Alcohol Dehydrogenase* / genetics
  • Alcohol Dehydrogenase* / metabolism
  • Geotrichum* / enzymology
  • Geotrichum* / genetics
  • Ketones* / chemistry
  • Ketones* / metabolism
  • Kinetics
  • Mutagenesis, Site-Directed*
  • Mutation
  • Substrate Specificity

Substances

  • Ketones
  • Alcohol Dehydrogenase