A multiparametric screen uncovers FDA-approved small molecules that potentiate the nuclear mechano-dysfunctions in ATR-defective cells

Sci Rep. 2024 Dec 28;14(1):30786. doi: 10.1038/s41598-024-80837-w.

Abstract

Targeting nuclear mechanics is emerging as a promising therapeutic strategy for sensitizing cancer cells to immunotherapy. Inhibition of the mechano-sensory kinase ATR leads to mechanical vulnerability of cancer cells, causing nuclear envelope softness and collapse and activation of the cGAS-STING-mediated innate immune response. Finding novel compounds that interfere with the non-canonical role of ATR in controlling nuclear mechanics presents an intriguing therapeutic opportunity. We carried out a multiparametric high-content screen to identify small molecules that affect nuclear envelope shape and to uncover novel players that could either ameliorate or further compromise the nuclear mechanical abnormalities of ATR-defective cells. The screen was performed in HeLa cells genetically depleted for ATR. Candidate hits were also tested in combination with the chemical inhibition of ATR by AZD6738, and their efficacy was further validated in the triple-negative breast cancer cell lines BT549 and HCC1937. We show that those compounds enhancing the abnormal nuclear shape of ATR-defective cells also synergize with AZD6738 to boost the expression of interferon-stimulated genes, highlighting the power of multiparametric screens to identify novel combined therapeutic interventions targeting nuclear mechanics for cancer immunotherapy.

MeSH terms

  • Ataxia Telangiectasia Mutated Proteins* / metabolism
  • Cell Line, Tumor
  • Cell Nucleus / drug effects
  • Cell Nucleus / metabolism
  • HeLa Cells
  • Humans
  • Indoles
  • Membrane Proteins
  • Morpholines / pharmacology
  • Nuclear Envelope / drug effects
  • Nuclear Envelope / metabolism
  • Pyrimidines / pharmacology
  • Small Molecule Libraries / pharmacology
  • Sulfonamides

Substances

  • Ataxia Telangiectasia Mutated Proteins
  • ATR protein, human
  • Small Molecule Libraries
  • Morpholines
  • Pyrimidines
  • STING1 protein, human
  • ceralasertib
  • Indoles
  • Membrane Proteins
  • Sulfonamides