The complete genome sequence of Stenotrophomonas sp. P2112 for genome mining of polyvinyl chloride degrading enzymes

Meixue Pan; Wenbin Guo; Jingjing Duan

doi:10.1016/j.margen.2024.101161

The complete genome sequence of Stenotrophomonas sp. P2112 for genome mining of polyvinyl chloride degrading enzymes

Mar Genomics. 2025 Mar 15:79:101161. doi: 10.1016/j.margen.2024.101161. Epub 2024 Nov 20.

Authors

Meixue Pan¹, Wenbin Guo², Jingjing Duan³

Affiliations

¹ College of Marine Living Resource Sciences and Management, Shanghai Ocean University, Shanghai 200100, China; Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, Fujian, China.
² College of Marine Living Resource Sciences and Management, Shanghai Ocean University, Shanghai 200100, China; Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, Fujian, China. Electronic address: [email protected].
³ College of Environment and Ecology, Xiamen University, Xiamen 361005, Fujian, China. Electronic address: [email protected].

PMID: 39855813
DOI: 10.1016/j.margen.2024.101161

Abstract

Stenotrophomonas sp. P2112, isolated from a marine sediment sample of the Pacific Ocean, can grow in mineral medium with polyvinyl chloride (PVC) plastic as sole carbon source. Here, we present the complete genome of Stenotrophomonas sp. P2112, which will facilitate the genome mining of PVC degrading enzymes. The total length of the sequenced genome consists of 4,382,508 bases, with mean G + C content of 66.61%. A total of 4024 coding genes including 73 tRNAs and 13 rRNAs were predicted in the genome. Some potential PVC degrading enzymes including monooxygenase and peroxidases were found in this genome.

Keywords: Complete genome; Degrading enzyme; PVC; Stenotrophomonas sp..

MeSH terms

Genome, Bacterial*
Polyvinyl Chloride*
Stenotrophomonas* / genetics
Whole Genome Sequencing

Substances

Polyvinyl Chloride