Complete sequence of a 38.4-kb human cosmid insert containing the polymorphic marker DXS455 from Xq28

DNA Seq. 1995;5(4):219-23. doi: 10.3109/10425179509030969.

Abstract

The complete DNA sequence of a cosmid mapping to human Xq28 (DXS455) has been determined using a shotgun approach (genbank accession number: L31948). The cosmid insert is 38.4 kb in length, and contains several repetitive sequences, including a highly repetitive region located in a fragment previously shown to contain a polymorphic VNTR locus, as well as short di- and tri-nucleotide repeats. In addition to the previously known VNTR locus, a CA-repeat and an unusual 800-bp repetitive region have been found to be polymorphic. The repeated sequence mapping to the site of the VNTR locus spans 480 bp in the cosmid. In addition to several AT-dinucleotide stretches, this repeat has four copies of a 25 bp repeat unit and flanking sequences similar to this 25-mer. No expressed sequences have so far been identified in this cosmid.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Bacteriophage M13 / genetics
  • Base Sequence
  • Cosmids / genetics*
  • DNA / genetics
  • Gene Library
  • Genetic Markers*
  • Humans
  • Minisatellite Repeats*
  • Molecular Sequence Data
  • Repetitive Sequences, Nucleic Acid*
  • X Chromosome*

Substances

  • Genetic Markers
  • DNA

Associated data

  • GENBANK/L31948