Solution structure of PMP-D2, a 35-residue peptide isolated from the insect Locusta migratoria

Biochemistry. 1994 Dec 27;33(51):15397-407. doi: 10.1021/bi00255a021.

Abstract

The three-dimensional solution structure of PMP-D2, a 35 amino acid peptide isolated from the insect Locusta migratoria, has been determined from two-dimensional 1H NMR spectroscopy data. The structure calculations were performed from 222 NOE-derived interproton distances and 11 dihedral angles calculated from the JHN-H alpha coupling constants, using either a combination of distance geometry and restrained simulated annealing or by restrained simulated annealing alone. PMP-D2 contains three disulfide bridges that have been assigned from NMR data and structure calculations and independently confirmed using chemical and enzymatic methods. The core region of PMP-D2 adopts a compact globular fold, stabilized by hydrophobic interactions, which consists of a short three-stranded antiparallel beta-sheet involving residues 8-11, 15-19, and 25-29. Back-calculation of the NOESY spectra was used to validate the final structures. Analysis of the CD spectra of PMP-D2 under various conditions of ionic strength and in the presence of organic solvents demonstrates the high stability of this molecule. PMP-D2 was recently shown to inhibit Ca2+ currents. This activity is discussed based on the comparison of PMP-D2 three-dimensional structure with the recently established three-dimensional structure of the Ca2+ channel blocker omega-conotoxin GVIA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Circular Dichroism
  • Cyclotides*
  • Disulfides
  • Grasshoppers / chemistry*
  • Hydrogen Bonding
  • Insect Hormones / chemistry*
  • Insect Proteins*
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Molecular Sequence Data
  • Neuropeptides / chemistry*
  • Protein Structure, Secondary
  • Protein Structure, Tertiary

Substances

  • Cyclotides
  • Disulfides
  • Insect Hormones
  • Insect Proteins
  • Neuropeptides
  • PMP-D2 peptide, insect