The human MCP-3 gene (SCYA7): cloning, sequence analysis, and assignment to the C-C chemokine gene cluster on chromosome 17q11.2-q12

Genomics. 1994 May 15;21(2):403-8. doi: 10.1006/geno.1994.1283.

Abstract

Monocyte chemotactic proteins (MCPs) are chemokines involved in macrophage recruitment during inflammation and cancer. A full-size MCP-3 cDNA was used to isolate the functional human MCP-3 gene. Based on restriction analysis, subclones were selected and the MCP-3 gene sequence was completed. In addition to a dense region with direct and inverted repeats and palindromic sequences, a double microsatellite (CA)n-(GA)n' was found at the 5'-end of the MCP-3 gene, and an RFLP was detected. The gene was regionally mapped by fluorescence in situ hybridization to human chromosome 17, subbands q11.2-q12. This site contains the MCP-subset of C-C chemokines and can be distinguished from the syntenic MIP-1 alpha locus. SCYA7 was assigned as the locus symbol of the MCP-3 gene. Double-labeling experiments confirmed the regional assignment of the MCP-3 gene close to the ERBB2 locus on human chromosome 17.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Blotting, Southern
  • Chemokine CCL7
  • Chemotactic Factors / genetics*
  • Chromosome Mapping
  • Chromosomes, Human, Pair 17*
  • Cloning, Molecular
  • Consensus Sequence
  • Cytokines / genetics*
  • DNA, Satellite / genetics
  • Deoxyribonuclease BamHI
  • ErbB Receptors / genetics
  • Female
  • Hominidae / genetics*
  • Humans
  • In Situ Hybridization, Fluorescence
  • Introns
  • Male
  • Molecular Sequence Data
  • Monocyte Chemoattractant Proteins*
  • Multigene Family*
  • Pedigree
  • Polymorphism, Restriction Fragment Length*
  • Proto-Oncogene Proteins / genetics
  • Receptor, ErbB-2
  • Regulatory Sequences, Nucleic Acid
  • Repetitive Sequences, Nucleic Acid*
  • Restriction Mapping

Substances

  • CCL7 protein, human
  • Chemokine CCL7
  • Chemotactic Factors
  • Cytokines
  • DNA, Satellite
  • Monocyte Chemoattractant Proteins
  • Proto-Oncogene Proteins
  • ErbB Receptors
  • Receptor, ErbB-2
  • Deoxyribonuclease BamHI

Associated data

  • GENBANK/X72304
  • GENBANK/X72308
  • GENBANK/X72309