Structural studies of two antiaggregant RGDW peptides by 1H and 13C NMR

Int J Pept Protein Res. 1994 Jul;44(1):70-9. doi: 10.1111/j.1399-3011.1994.tb00406.x.

Abstract

The structural features of Arg-Gly-Asp-related sequences have been investigated by 1H and 13C NMR. Two linear peptides which inhibit platelet aggregation with a high efficiency have been studied: D-Arg-Gly-Asp-Trp and L-Arg-Gly-Asp-Trp. Analysis of pH titration effects, amide proton exchange rates and inter-proton distances obtained from ROESY spectra suggest that these small fragments predominantly adopt a type II' beta-turn structure in solution. Folding features of a non-active cyclic peptide based on the same sequence (cyclo-[Arg-Gly-Asp-Trp]2) have also been investigated. The biological relevance of these structures is discussed.

MeSH terms

  • Amino Acid Sequence
  • Hydrogen-Ion Concentration
  • Magnetic Resonance Spectroscopy
  • Molecular Sequence Data
  • Oligopeptides / chemistry*
  • Peptides / chemistry
  • Platelet Aggregation Inhibitors / chemistry*
  • Protein Conformation
  • Structure-Activity Relationship

Substances

  • Oligopeptides
  • Peptides
  • Platelet Aggregation Inhibitors
  • arginyl-glycyl-aspartic acid