Molecular dissection of influenza virus nucleoprotein: deletion mapping of the RNA binding domain

J Virol. 1994 Dec;68(12):8433-6. doi: 10.1128/JVI.68.12.8433-8436.1994.

Abstract

Influenza virus nucleoprotein (NP) is associated with the genome RNA, forming ribonucleoprotein cores. To identify the amino acid sequence involved in RNA binding, we performed Northwestern blot analysis with a set of N- and C-terminal deletion mutants of NP produced in Escherichia coli. The RNA binding region has been mapped between amino acid residues 91 and 188, a stretch of residues that contains a sequence that is not only highly conserved among NPs from A-, B-, and C-type influenza viruses but also similar to the RNA binding domain of a plant virus movement protein.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Cell Nucleus / metabolism
  • Electrophoresis, Polyacrylamide Gel
  • Escherichia coli
  • Immunoblotting
  • Influenza A virus / genetics
  • Influenza A virus / metabolism*
  • Molecular Sequence Data
  • Nucleocapsid Proteins
  • Nucleoproteins / biosynthesis
  • Nucleoproteins / isolation & purification
  • Nucleoproteins / metabolism*
  • Orthomyxoviridae / genetics
  • Orthomyxoviridae / metabolism
  • Plasmids
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Recombinant Proteins / biosynthesis
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Restriction Mapping
  • Sequence Deletion*
  • Sequence Homology, Amino Acid
  • Viral Core Proteins / biosynthesis
  • Viral Core Proteins / isolation & purification
  • Viral Core Proteins / metabolism*

Substances

  • NP protein, Influenza A virus
  • Nucleocapsid Proteins
  • Nucleoproteins
  • RNA-Binding Proteins
  • Recombinant Proteins
  • Viral Core Proteins