Typing of Mycoplasma pneumoniae by nucleic acid sequence-based amplification, NASBA

Mol Cell Probes. 1996 Oct;10(5):319-24. doi: 10.1006/mcpr.1996.0043.

Abstract

Nucleic acid sequence-based amplification, NASBA, is an isothermal amplification technique for nucleic acids and was used for typing a collection of 24 Mycoplasma pneumoniae strains. A set of primers was chosen from the 16S rRNA sequence alignment of Mycoplasma species. The nucleotide sequences of the (-)RNA amplicons were determined for M. pneumoniae strains M15/83 (type 1) and FH (type 2), and revealed a one-point difference at the 16S rRNA level between the two types. Based on this result, two type-specific probes were constructed. The probes were hybridized in solution with the amplified nucleic acids of 24 M. pneumoniae strains in an enzyme-linked gel assay (ELGA). The results obtained by NASBA-based typing are in agreement with the classification of the 24 M. pneumoniae strains into two types by other typing methods, confirming the reliability of this technique.

MeSH terms

  • Bacterial Typing Techniques*
  • DNA Primers / genetics*
  • Gene Amplification*
  • Molecular Probe Techniques
  • Mycoplasma pneumoniae / classification*
  • Mycoplasma pneumoniae / genetics
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sensitivity and Specificity
  • Sequence Alignment
  • Sequence Analysis, RNA

Substances

  • DNA Primers
  • RNA, Bacterial
  • RNA, Ribosomal, 16S