Structure and dynamics of pentaglycyl bridges in the cell walls of Staphylococcus aureus by 13C-15N REDOR NMR

Biochemistry. 1997 Aug 12;36(32):9859-66. doi: 10.1021/bi970495d.

Abstract

Whole cells and cell-wall fractions of Staphylococcusaureus have been labeled by various combinations of [1-13C]glycine, [15N]glycine, L--6-13C-lysine, L--6-15N-lysine, D--1-13C-alanine, and D--15N-alanine. The resulting materials have been examined using 13C and 15N solid-state, magic-angle spinning NMR techniques including cross-polarization, double cross-polarization, and rotational-echo double resonance. The results of these measurements indicate that the peptidoglycan glycyl bridges are complete (five units long) and form cross-links between three-quarters of all peptide stems. The pentaglycyl bridges are immobilized in lyophilized cell-wall fractions in a compact conformation with inter-residue spacings comparable to those of an alpha helix. The bridges have a similar compact conformation in intact whole cells, regardless of whether the cells have been lyophilized or were hydrated and frozen at -10 degrees C. The bridges are also in a time-averaged compact conformation in whole cells at 0 degrees C but with sizable structural fluctuations associated with local mobility. A small fraction of bridges are in extended-chain conformations.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Cell Wall / chemistry
  • Cross-Linking Reagents
  • Glycine / chemistry*
  • Magnetic Resonance Spectroscopy
  • Peptidoglycan / chemistry
  • Peptidoglycan / isolation & purification
  • Protein Conformation
  • Staphylococcus aureus / chemistry*
  • Structure-Activity Relationship
  • Thermodynamics

Substances

  • Cross-Linking Reagents
  • Peptidoglycan
  • Glycine