Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family

Nat Struct Biol. 1998 Feb;5(2):110-4. doi: 10.1038/nsb0298-110.

Abstract

RNA polymerase II subunit RPB8 is an essential subunit that is highly conserved throughout eukaryotic evolution and is present in all three types of nuclear RNA polymerases. We report the first high resolution structural insight into eukaryotic RNA polymerase architecture with the solution structure of RPB8 from Saccharomyces cerevisiae. It consists of an eight stranded, antiparallel beta-barrel, four short helical regions and a large, unstructured omega-loop. The strands are connected in classic Greek-key fashion. The overall topology is unusual and contains a striking C2 rotational symmetry. Furthermore, it is most likely a novel associate of the oligonucleotide/oligosaccharide (OB) binding protein class.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Evolution, Molecular
  • Models, Molecular
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Structure, Secondary*
  • RNA Polymerase II / chemistry*
  • Recombinant Fusion Proteins
  • Saccharomyces cerevisiae / enzymology*
  • Sequence Alignment

Substances

  • Recombinant Fusion Proteins
  • RNA Polymerase II

Associated data

  • PDB/1A1D