A Dde I RFLP in exon 21 of human EL1 gene, encoding protein 4.1, detectable by SSCP

Hum Mutat. 1998;11(4):342-3.

Abstract

Protein 4.1 is a major component of the junctional complex at the red cell skeleton. Genomic studies have recently evidenced that the encoding gene (EL1 locus) is present in a single copy per haploid genome. Several RFLPs have already been characterized within intron sequences. Here, we describe the first RFLP found within the coding sequence. This polymorphism (C or T at position 2723, in exon 21) does not affect the amino acid sequence (Thr-->Thr). It can be detected by either Dde I restriction digestion of an appropriate PCR product, or simply by SSCP These findings should facilitate analysis of families with 4.1 deficiencies causing hereditary elliptocytosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Base Sequence
  • Cytoskeletal Proteins*
  • DNA Primers / genetics
  • DNA, Complementary / genetics
  • Deoxyribonucleases, Type II Site-Specific
  • Exons
  • Humans
  • Membrane Proteins / genetics*
  • Neuropeptides*
  • Polymerase Chain Reaction
  • Polymorphism, Restriction Fragment Length*
  • Polymorphism, Single-Stranded Conformational*

Substances

  • Cytoskeletal Proteins
  • DNA Primers
  • DNA, Complementary
  • Membrane Proteins
  • Neuropeptides
  • erythrocyte membrane band 4.1 protein
  • erythrocyte membrane protein band 4.1-like 1
  • endodeoxyribonuclease DdeI
  • Deoxyribonucleases, Type II Site-Specific