Different contributions of three zinc fingers of transcription factor Sp1 to DNA recognition: novel binding mode of N-terminal finger 1

Nucleic Acids Symp Ser. 1997:(37):151-2.

Abstract

To clarify binding properties of the first zinc finger of Sp1, finger 1, to GC-box DNA, two-finger mutant peptides Sp1 (zf12) and Sp1 (zf23) were created and their DNA binding characteristics have been compared with those of native three-zinc finger protein Sp1. Some gel electrophoretic experiments involving DNase I footprinting and gel mobility shift assays reveal that finger 1 is not essential to sequence-specific DNA recognition, but moderately contributes to total binding affinity and overall sequence specificity by three zinc fingers of Sp1.

MeSH terms

  • Amino Acid Sequence
  • Base Composition
  • Base Sequence
  • Binding Sites
  • Consensus Sequence
  • Cytosine
  • DNA / chemistry*
  • DNA / metabolism*
  • DNA Footprinting
  • Deoxyribonuclease I
  • Guanine
  • Models, Molecular
  • Oligodeoxyribonucleotides / chemistry*
  • Oligodeoxyribonucleotides / metabolism
  • Protein Conformation
  • Sp1 Transcription Factor / chemistry*
  • Sp1 Transcription Factor / metabolism*
  • Zinc Fingers*

Substances

  • Oligodeoxyribonucleotides
  • Sp1 Transcription Factor
  • Guanine
  • Cytosine
  • DNA
  • Deoxyribonuclease I