A new exon in the 5' untranslated region of the connexin32 gene

Eur J Biochem. 1999 Jan;259(1-2):188-96. doi: 10.1046/j.1432-1327.1999.00029.x.

Abstract

The cloning and sequencing of two bovine connexin32 cDNAs are reported. Comparative analysis with known corresponding mammalian cDNA and protein sequences, besides confirming a high degree of similarity among these proteins, allowed us to identify some specific features of the bovine connexin32 gene. The latter include: the presence of a novel exon in the 5' UTR which is alternatively spliced, giving rise to a new mRNA species; the presence of two potential hairpin loops in the 5' and 3' UTR; and the presence of an additional amino acid, glycine235, in the C-terminal domain of the 284 residue protein. Among the common features, the presence of polypyrimidine clusters within the 3' UTR, containing a consensus sequence for a cis-acting element, is noteworthy. Expression of connexin32 mRNAs was analysed in 16 bovine tissues. Transcript analysis suggests the presence, in cattle, of an alternative downstream promoter.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions*
  • Alternative Splicing*
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cattle
  • Cloning, Molecular
  • Connexins / genetics*
  • Exons*
  • Gap Junction beta-1 Protein
  • Introns
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Promoter Regions, Genetic
  • Sequence Analysis, DNA
  • Tissue Distribution

Substances

  • 5' Untranslated Regions
  • Connexins

Associated data

  • GENBANK/AJ224440
  • GENBANK/X95311