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The value of long-term ecological research for evolutionary insights.
Cocciardi JM, Hoffman AM, Alvarado-Serrano DF, Anderson J, Blumstein M, Boehm EL, Bolin LG, Borokini IT, Bradburd GS, Branch HA, Brudvig LA, Chen Y, Collins SL, Des Marais DL, Gamba D, Hanan NP, Howard MM, Jaros J, Juenger TE, Kooyers NJ, Kottler EJ, Lau JA, Menon M, Moeller DA, Mozdzer TJ, Sheth SN, Smith M, Toll K, Ungerer MC, Vahsen ML, Wadgymar SM, Waananen A, Whitney KD, Avolio ML. Cocciardi JM, et al. Among authors: hoffman am. Nat Ecol Evol. 2024 Sep;8(9):1584-1592. doi: 10.1038/s41559-024-02464-y. Epub 2024 Aug 2. Nat Ecol Evol. 2024. PMID: 39095611 Review.
Best practices to evaluate the impact of biomedical research software-metric collection beyond citations.
Afiaz A, Ivanov AA, Chamberlin J, Hanauer D, Savonen CL, Goldman MJ, Morgan M, Reich M, Getka A, Holmes A, Pati S, Knight D, Boutros PC, Bakas S, Caporaso JG, Del Fiol G, Hochheiser H, Haas B, Schloss PD, Eddy JA, Albrecht J, Fedorov A, Waldron L, Hoffman AM, Bradshaw RL, Leek JT, Wright C. Afiaz A, et al. Among authors: hoffman am. Bioinformatics. 2024 Aug 2;40(8):btae469. doi: 10.1093/bioinformatics/btae469. Bioinformatics. 2024. PMID: 39067017 Free PMC article.
Ten simple rules for teaching an introduction to R.
Hoffman AM, Wright C. Hoffman AM, et al. PLoS Comput Biol. 2024 May 16;20(5):e1012018. doi: 10.1371/journal.pcbi.1012018. eCollection 2024 May. PLoS Comput Biol. 2024. PMID: 38753606 Free PMC article. No abstract available.
Reply.
Spechler SJ, Reddy CA, Allen-Brady K, Uchida AM, Peterson KA, Hoffman AM, Souza RF. Spechler SJ, et al. Among authors: hoffman am. Clin Gastroenterol Hepatol. 2024 May;22(5):1145. doi: 10.1016/j.cgh.2023.09.026. Epub 2023 Oct 5. Clin Gastroenterol Hepatol. 2024. PMID: 37802273 No abstract available.
Evaluation of software impact designed for biomedical research: Are we measuring what's meaningful?
Afiaz A, Ivanov AA, Chamberlin J, Hanauer D, Savonen CL, Goldman MJ, Morgan M, Reich M, Getka A, Holmes A, Pati S, Knight D, Boutros PC, Bakas S, Caporaso JG, Del Fiol G, Hochheiser H, Haas B, Schloss PD, Eddy JA, Albrecht J, Fedorov A, Waldron L, Hoffman AM, Bradshaw RL, Leek JT, Wright C. Afiaz A, et al. Among authors: hoffman am. ArXiv [Preprint]. 2023 Jun 5:arXiv:2306.03255v1. ArXiv. 2023. PMID: 37332562 Free PMC article. Preprint.
Open-source Tools for Training Resources - OTTR.
Savonen C, Wright C, Hoffman AM, Muschelli J, Cox K, Tan FJ, Leek JT. Savonen C, et al. Among authors: hoffman am. J Stat Data Sci Educ. 2023;31(1):57-65. doi: 10.1080/26939169.2022.2118646. Epub 2022 Oct 31. J Stat Data Sci Educ. 2023. PMID: 37207236 Free PMC article.
Metabolic Strategies Shared by Basement Residents of the Lost City Hydrothermal Field.
Brazelton WJ, McGonigle JM, Motamedi S, Pendleton HL, Twing KI, Miller BC, Lowe WJ, Hoffman AM, Prator CA, Chadwick GL, Anderson RE, Thomas E, Butterfield DA, Aquino KA, Früh-Green GL, Schrenk MO, Lang SQ. Brazelton WJ, et al. Among authors: hoffman am. Appl Environ Microbiol. 2022 Sep 13;88(17):e0092922. doi: 10.1128/aem.00929-22. Epub 2022 Aug 11. Appl Environ Microbiol. 2022. PMID: 35950875 Free PMC article.
164 results