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Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW. Smith TP, et al. Among authors: karamycheva s. Genome Res. 2001 Apr;11(4):626-30. doi: 10.1101/gr.170101. Genome Res. 2001. PMID: 11282978 Free PMC article.
Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA).
Lee Y, Sultana R, Pertea G, Cho J, Karamycheva S, Tsai J, Parvizi B, Cheung F, Antonescu V, White J, Holt I, Liang F, Quackenbush J. Lee Y, et al. Among authors: karamycheva s. Genome Res. 2002 Mar;12(3):493-502. doi: 10.1101/gr.212002. Genome Res. 2002. PMID: 11875039 Free PMC article.
An optimized protocol for analysis of EST sequences.
Liang F, Holt I, Pertea G, Karamycheva S, Salzberg SL, Quackenbush J. Liang F, et al. Among authors: karamycheva s. Nucleic Acids Res. 2000 Sep 15;28(18):3657-65. doi: 10.1093/nar/28.18.3657. Nucleic Acids Res. 2000. PMID: 10982889 Free PMC article.
Comparative analyses of potato expressed sequence tag libraries.
Ronning CM, Stegalkina SS, Ascenzi RA, Bougri O, Hart AL, Utterbach TR, Vanaken SE, Riedmuller SB, White JA, Cho J, Pertea GM, Lee Y, Karamycheva S, Sultana R, Tsai J, Quackenbush J, Griffiths HM, Restrepo S, Smart CD, Fry WE, Van Der Hoeven R, Tanksley S, Zhang P, Jin H, Yamamoto ML, Baker BJ, Buell CR. Ronning CM, et al. Among authors: karamycheva s. Plant Physiol. 2003 Feb;131(2):419-29. doi: 10.1104/pp.013581. Plant Physiol. 2003. PMID: 12586867 Free PMC article.
28 results