Shibata M - Search Results

1

A molecular orbital study of a model of the Mg2+ coordination complex of the self splicing reaction of ribosomal RNA.

McCourt M, Shibata M, McIver JW, Rein R. McCourt M, et al. Among authors: shibata m. J Mol Struct. 1988;179:145-52. doi: 10.1016/0166-1280(88)80119-2. J Mol Struct. 1988. PMID: 11542141

2

Modeling study on the cleavage step of the self-splicing reaction in group I introns.

Setlik RF, Garduno-Juarez R, Manchester JI, Shibata M, Ornstein RL, Rein R. Setlik RF, et al. Among authors: shibata m. J Biomol Struct Dyn. 1993 Jun;10(6):945-72. doi: 10.1080/07391102.1993.10508689. J Biomol Struct Dyn. 1993. PMID: 8357544

3

Molecular modelling of protein-nucleic acid interactions.

Rein R, Kieber-Emmons T, Haydock K, Garduno-Juarez R, Shibata M. Rein R, et al. Among authors: shibata m. J Biomol Struct Dyn. 1983 Dec;1(4):1051-79. doi: 10.1080/07391102.1983.10507502. J Biomol Struct Dyn. 1983. PMID: 6400904

4

A full-coordinate model of the polymerase domain of HIV-1 reverse transcriptase and its interaction with a nucleic acid substrate.

Setlik RF, Meyer DJ, Shibata M, Roskwitalski R, Ornstein RL, Rein R. Setlik RF, et al. Among authors: shibata m. J Biomol Struct Dyn. 1994 Aug;12(1):037-60. J Biomol Struct Dyn. 1994. PMID: 7531452

5

Applicability of PM3 to transphosphorylation reaction path: toward designing a minimal ribozyme.

Manchester JI, Shibata M, Setlik RF, Ornstein RL, Rein R. Manchester JI, et al. Among authors: shibata m. Orig Life Evol Biosph. 1993 Dec;23(5-6):419-27. doi: 10.1007/BF01582089. Orig Life Evol Biosph. 1993. PMID: 8115165

6

Modeling of a possible conformational change associated with the catalytic mechanism in the hammerhead ribozyme.

Setlik RF, Shibata M, Sarma RH, Sarma MH, Kazim AL, Ornstein RL, Tomasi TB, Rein R. Setlik RF, et al. Among authors: shibata m. J Biomol Struct Dyn. 1995 Dec;13(3):515-22. doi: 10.1080/07391102.1995.10508861. J Biomol Struct Dyn. 1995. PMID: 8825731

7

Structure of an anti-HIV-1 hammerhead ribozyme complex with a 17-mer DNA substrate analog of HIV-1 gag RNA and a mechanism for the cleavage reaction: 750 MHz NMR and computer experiments.

Ojha RP, Dhingra MM, Sarma MH, Myer YP, Setlik RF, Shibata M, Kazim AL, Ornstein RL, Rein R, Turner CJ, Sarma RH. Ojha RP, et al. Among authors: shibata m. J Biomol Struct Dyn. 1997 Oct;15(2):185-215. doi: 10.1080/07391102.1997.10508186. J Biomol Struct Dyn. 1997. PMID: 9399149

8

Structural investigation of protein kinase C inhibitors.

Barak D, Shibata M, Rein R. Barak D, et al. Among authors: shibata m. J Mol Struct. 1991;230:419-29. doi: 10.1016/0166-1280(91)85193-b. J Mol Struct. 1991. PMID: 11538178

9

Potential-derived point-charge model study of electrostatic interaction energies in some hydrogen-bonded systems.

Ray NK, Shibata M, Bolis G, Rein R. Ray NK, et al. Among authors: shibata m. Int J Quantum Chem. 1985;27:427-37. doi: 10.1002/qua.560270407. Int J Quantum Chem. 1985. PMID: 11542007

10

A Full-Coordinate Model of the Polymerase Domain of HIV-I Reverse Transcriptase and its Interaction With a Nucleic Acid Substrate.

Setlik RF, Meyer DJ, Shibata M, Roskwitalski R, Ornstein RL, Rein R. Setlik RF, et al. Among authors: shibata m. J Biomol Struct Dyn. 1994 Aug;12(1):37-60. doi: 10.1080/07391102.1994.10508087. J Biomol Struct Dyn. 1994. PMID: 22671907

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