Rombauts S - Search Results

1

INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling.

Thijs G, Moreau Y, De Smet F, Mathys J, Lescot M, Rombauts S, Rouze P, De Moor B, Marchal K. Thijs G, et al. Among authors: rombauts s. Bioinformatics. 2002 Feb;18(2):331-2. doi: 10.1093/bioinformatics/18.2.331. Bioinformatics. 2002. PMID: 11847086

2

A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

Thijs G, Marchal K, Lescot M, Rombauts S, De Moor B, Rouzé P, Moreau Y. Thijs G, et al. Among authors: rombauts s. J Comput Biol. 2002;9(2):447-64. doi: 10.1089/10665270252935566. J Comput Biol. 2002. PMID: 12015892 Free article.

3

A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling.

Thijs G, Lescot M, Marchal K, Rombauts S, De Moor B, Rouzé P, Moreau Y. Thijs G, et al. Among authors: rombauts s. Bioinformatics. 2001 Dec;17(12):1113-22. doi: 10.1093/bioinformatics/17.12.1113. Bioinformatics. 2001. PMID: 11751219

4

AFLPinSilico, simulating AFLP fingerprints.

Rombauts S, Van De Peer Y, Rouzé P. Rombauts S, et al. Bioinformatics. 2003 Apr 12;19(6):776-7. doi: 10.1093/bioinformatics/btg090. Bioinformatics. 2003. PMID: 12691992

5

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.

Lescot M, Déhais P, Thijs G, Marchal K, Moreau Y, Van de Peer Y, Rouzé P, Rombauts S. Lescot M, et al. Among authors: rombauts s. Nucleic Acids Res. 2002 Jan 1;30(1):325-7. doi: 10.1093/nar/30.1.325. Nucleic Acids Res. 2002. PMID: 11752327 Free PMC article.

6

Computational approaches to identify promoters and cis-regulatory elements in plant genomes.

Rombauts S, Florquin K, Lescot M, Marchal K, Rouzé P, van de Peer Y. Rombauts S, et al. Plant Physiol. 2003 Jul;132(3):1162-76. doi: 10.1104/pp.102.017715. Plant Physiol. 2003. PMID: 12857799 Free PMC article. Review.

7

Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences.

Pavy N, Rombauts S, Déhais P, Mathé C, Ramana DV, Leroy P, Rouzé P. Pavy N, et al. Among authors: rombauts s. Bioinformatics. 1999 Nov;15(11):887-99. doi: 10.1093/bioinformatics/15.11.887. Bioinformatics. 1999. PMID: 10743555

8

PlantCARE, a plant cis-acting regulatory element database.

Rombauts S, Déhais P, Van Montagu M, Rouzé P. Rombauts S, et al. Nucleic Acids Res. 1999 Jan 1;27(1):295-6. doi: 10.1093/nar/27.1.295. Nucleic Acids Res. 1999. PMID: 9847207 Free PMC article.

9

Genome annotation: which tools do we have for it?

Rouzé P, Pavy N, Rombauts S. Rouzé P, et al. Among authors: rombauts s. Curr Opin Plant Biol. 1999 Apr;2(2):90-5. doi: 10.1016/S1369-5266(99)80019-3. Curr Opin Plant Biol. 1999. PMID: 10322203 Review.

10

Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements.

Lescot M, Rombauts S, Zhang J, Aubourg S, Mathé C, Jansson S, Rouzé P, Boerjan W. Lescot M, et al. Among authors: rombauts s. Theor Appl Genet. 2004 Jun;109(1):10-22. doi: 10.1007/s00122-004-1621-0. Epub 2004 Apr 14. Theor Appl Genet. 2004. PMID: 15085260

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