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Page 1
Genome sequence of Yersinia pestis KIM.
Deng W, Burland V, Plunkett G 3rd, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B, Zhou S, Schwartz DC, Fetherston JD, Lindler LE, Brubaker RR, Plano GV, Straley SC, McDonough KA, Nilles ML, Matson JS, Blattner FR, Perry RD. Deng W, et al. Among authors: perna nt. J Bacteriol. 2002 Aug;184(16):4601-11. doi: 10.1128/JB.184.16.4601-4611.2002. J Bacteriol. 2002. PMID: 12142430 Free PMC article.
A whole-genome shotgun optical map of Yersinia pestis strain KIM.
Zhou S, Deng W, Anantharaman TS, Lim A, Dimalanta ET, Wang J, Wu T, Chunhong T, Creighton R, Kile A, Kvikstad E, Bechner M, Yen G, Garic-Stankovic A, Severin J, Forrest D, Runnheim R, Churas C, Lamers C, Perna NT, Burland V, Blattner FR, Mishra B, Schwartz DC. Zhou S, et al. Among authors: perna nt. Appl Environ Microbiol. 2002 Dec;68(12):6321-31. doi: 10.1128/AEM.68.12.6321-6331.2002. Appl Environ Microbiol. 2002. PMID: 12450857 Free PMC article.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.
Glasner JD, Yang CH, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van Gijsegem F, Yang S, Franza T, Expert D, Plunkett G 3rd, San Francisco MJ, Charkowski AO, Py B, Bell K, Rauscher L, Rodriguez-Palenzuela P, Toussaint A, Holeva MC, He SY, Douet V, Boccara M, Blanco C, Toth I, Anderson BD, Biehl BS, Mau B, Flynn SM, Barras F, Lindeberg M, Birch PR, Tsuyumu S, Shi X, Hibbing M, Yap MN, Carpentier M, Dassa E, Umehara M, Kim JF, Rusch M, Soni P, Mayhew GF, Fouts DE, Gill SR, Blattner FR, Keen NT, Perna NT. Glasner JD, et al. Among authors: perna nt. J Bacteriol. 2011 Apr;193(8):2076-7. doi: 10.1128/JB.01513-10. Epub 2011 Jan 7. J Bacteriol. 2011. PMID: 21217001 Free PMC article.
The complete genome sequence of Escherichia coli K-12.
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y. Blattner FR, et al. Among authors: perna nt. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453. Science. 1997. PMID: 9278503
Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.
Welch RA, Burland V, Plunkett G 3rd, Redford P, Roesch P, Rasko D, Buckles EL, Liou SR, Boutin A, Hackett J, Stroud D, Mayhew GF, Rose DJ, Zhou S, Schwartz DC, Perna NT, Mobley HL, Donnenberg MS, Blattner FR. Welch RA, et al. Among authors: perna nt. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):17020-4. doi: 10.1073/pnas.252529799. Epub 2002 Dec 5. Proc Natl Acad Sci U S A. 2002. PMID: 12471157 Free PMC article.
Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T.
Wei J, Goldberg MB, Burland V, Venkatesan MM, Deng W, Fournier G, Mayhew GF, Plunkett G 3rd, Rose DJ, Darling A, Mau B, Perna NT, Payne SM, Runyen-Janecky LJ, Zhou S, Schwartz DC, Blattner FR. Wei J, et al. Among authors: perna nt. Infect Immun. 2003 May;71(5):2775-86. doi: 10.1128/IAI.71.5.2775-2786.2003. Infect Immun. 2003. PMID: 12704152 Free PMC article.
ASAP, a systematic annotation package for community analysis of genomes.
Glasner JD, Liss P, Plunkett G 3rd, Darling A, Prasad T, Rusch M, Byrnes A, Gilson M, Biehl B, Blattner FR, Perna NT. Glasner JD, et al. Among authors: perna nt. Nucleic Acids Res. 2003 Jan 1;31(1):147-51. doi: 10.1093/nar/gkg125. Nucleic Acids Res. 2003. PMID: 12519969 Free PMC article.
GRIL: genome rearrangement and inversion locator.
Darling AE, Mau B, Blattner FR, Perna NT. Darling AE, et al. Among authors: perna nt. Bioinformatics. 2004 Jan 1;20(1):122-4. doi: 10.1093/bioinformatics/btg378. Bioinformatics. 2004. PMID: 14693819
65 results