Roy SW - Search Results

1

The signal of ancient introns is obscured by intron density and homolog number.

Roy SW, Fedorov A, Gilbert W. Roy SW, et al. Proc Natl Acad Sci U S A. 2002 Nov 26;99(24):15513-7. doi: 10.1073/pnas.242600199. Epub 2002 Nov 13. Proc Natl Acad Sci U S A. 2002. PMID: 12432089 Free PMC article.

2

Intron positions correlate with module boundaries in ancient proteins.

de Souza SJ, Long M, Schoenbach L, Roy SW, Gilbert W. de Souza SJ, et al. Among authors: roy sw. Proc Natl Acad Sci U S A. 1996 Dec 10;93(25):14632-6. doi: 10.1073/pnas.93.25.14632. Proc Natl Acad Sci U S A. 1996. PMID: 8962105 Free PMC article.

3

The correlation between introns and the three-dimensional structure of proteins.

de Souza SJ, Long M, Schoenbach L, Roy SW, Gilbert W. de Souza SJ, et al. Among authors: roy sw. Gene. 1997 Dec 31;205(1-2):141-4. doi: 10.1016/s0378-1119(97)00401-0. Gene. 1997. PMID: 9461387

4

Toward a resolution of the introns early/late debate: only phase zero introns are correlated with the structure of ancient proteins.

de Souza SJ, Long M, Klein RJ, Roy S, Lin S, Gilbert W. de Souza SJ, et al. Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):5094-9. doi: 10.1073/pnas.95.9.5094. Proc Natl Acad Sci U S A. 1998. PMID: 9560234 Free PMC article.

5

Centripetal modules and ancient introns.

Roy SW, Nosaka M, de Souza SJ, Gilbert W. Roy SW, et al. Gene. 1999 Sep 30;238(1):85-91. doi: 10.1016/s0378-1119(99)00292-9. Gene. 1999. PMID: 10570987

6

Footprints of primordial introns on the eukaryotic genome.

Roy SW, Lewis BP, Fedorov A, Gilbert W. Roy SW, et al. Trends Genet. 2001 Sep;17(9):496-501. doi: 10.1016/s0168-9525(01)02375-7. Trends Genet. 2001. PMID: 11530796 No abstract available.

7

Intron distribution difference for 276 ancient and 131 modern genes suggests the existence of ancient introns.

Fedorov A, Cao X, Saxonov S, de Souza SJ, Roy SW, Gilbert W. Fedorov A, et al. Among authors: roy sw. Proc Natl Acad Sci U S A. 2001 Nov 6;98(23):13177-82. doi: 10.1073/pnas.231491498. Epub 2001 Oct 30. Proc Natl Acad Sci U S A. 2001. PMID: 11687643 Free PMC article.

8

Phylogenetically older introns strongly correlate with module boundaries in ancient proteins.

Fedorov A, Roy S, Cao X, Gilbert W. Fedorov A, et al. Genome Res. 2003 Jun;13(6A):1155-7. doi: 10.1101/gr.1008203. Epub 2003 May 12. Genome Res. 2003. PMID: 12743017 Free PMC article.

9

Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain.

Roy SW, Fedorov A, Gilbert W. Roy SW, et al. Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):7158-62. doi: 10.1073/pnas.1232297100. Epub 2003 May 30. Proc Natl Acad Sci U S A. 2003. PMID: 12777620 Free PMC article.

10

Mystery of intron gain.

Fedorov A, Roy S, Fedorova L, Gilbert W. Fedorov A, et al. Genome Res. 2003 Oct;13(10):2236-41. doi: 10.1101/gr.1029803. Epub 2003 Sep 15. Genome Res. 2003. PMID: 12975308 Free PMC article.

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