King OD - Search Results

1

A non-parametric model for transcription factor binding sites.

King OD, Roth FP. King OD, et al. Nucleic Acids Res. 2003 Oct 1;31(19):e116. doi: 10.1093/nar/gng117. Nucleic Acids Res. 2003. PMID: 14500844 Free PMC article.

2

GoFish finds genes with combinations of Gene Ontology attributes.

Berriz GF, White JV, King OD, Roth FP. Berriz GF, et al. Among authors: king od. Bioinformatics. 2003 Apr 12;19(6):788-9. doi: 10.1093/bioinformatics/btg088. Bioinformatics. 2003. PMID: 12691998

3

Predicting gene function from patterns of annotation.

King OD, Foulger RE, Dwight SS, White JV, Roth FP. King OD, et al. Genome Res. 2003 May;13(5):896-904. doi: 10.1101/gr.440803. Epub 2003 Apr 14. Genome Res. 2003. PMID: 12695322 Free PMC article.

4

Predicting phenotype from patterns of annotation.

King OD, Lee JC, Dudley AM, Janse DM, Church GM, Roth FP. King OD, et al. Bioinformatics. 2003;19 Suppl 1:i183-9. doi: 10.1093/bioinformatics/btg1024. Bioinformatics. 2003. PMID: 12855456

5

Characterizing gene sets with FuncAssociate.

Berriz GF, King OD, Bryant B, Sander C, Roth FP. Berriz GF, et al. Among authors: king od. Bioinformatics. 2003 Dec 12;19(18):2502-4. doi: 10.1093/bioinformatics/btg363. Bioinformatics. 2003. PMID: 14668247

6

Predicting co-complexed protein pairs using genomic and proteomic data integration.

Zhang LV, Wong SL, King OD, Roth FP. Zhang LV, et al. Among authors: king od. BMC Bioinformatics. 2004 Apr 16;5:38. doi: 10.1186/1471-2105-5-38. BMC Bioinformatics. 2004. PMID: 15090078 Free PMC article.

7

Predicting protein complex membership using probabilistic network reliability.

Asthana S, King OD, Gibbons FD, Roth FP. Asthana S, et al. Among authors: king od. Genome Res. 2004 Jun;14(6):1170-5. doi: 10.1101/gr.2203804. Epub 2004 May 12. Genome Res. 2004. PMID: 15140827 Free PMC article.

8

Combining biological networks to predict genetic interactions.

Wong SL, Zhang LV, Tong AH, Li Z, Goldberg DS, King OD, Lesage G, Vidal M, Andrews B, Bussey H, Boone C, Roth FP. Wong SL, et al. Among authors: king od. Proc Natl Acad Sci U S A. 2004 Nov 2;101(44):15682-7. doi: 10.1073/pnas.0406614101. Epub 2004 Oct 20. Proc Natl Acad Sci U S A. 2004. PMID: 15496468 Free PMC article.

9

Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function.

Tian W, Zhang LV, Taşan M, Gibbons FD, King OD, Park J, Wunderlich Z, Cherry JM, Roth FP. Tian W, et al. Among authors: king od. Genome Biol. 2008;9 Suppl 1(Suppl 1):S7. doi: 10.1186/gb-2008-9-s1-s7. Epub 2008 Jun 27. Genome Biol. 2008. PMID: 18613951 Free PMC article.

10

Knocking out multigene redundancies via cycles of sexual assortment and fluorescence selection.

Suzuki Y, St Onge RP, Mani R, King OD, Heilbut A, Labunskyy VM, Chen W, Pham L, Zhang LV, Tong AH, Nislow C, Giaever G, Gladyshev VN, Vidal M, Schow P, Lehár J, Roth FP. Suzuki Y, et al. Among authors: king od. Nat Methods. 2011 Feb;8(2):159-64. doi: 10.1038/nmeth.1550. Epub 2011 Jan 9. Nat Methods. 2011. PMID: 21217751 Free PMC article.

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