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Page 1
Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, Dugan-Rocha S, Miner G, Morgan M, Hawes A, Gill R, Celera, Holt RA, Adams MD, Amanatides PG, Baden-Tillson H, Barnstead M, Chin S, Evans CA, Ferriera S, Fosler C, Glodek A, Gu Z, Jennings D, Kraft CL, Nguyen T, Pfannkoch CM, Sitter C, Sutton GG, Venter JC, Woodage T, Smith D, Lee HM, Gustafson E, Cahill P, Kana A, Doucette-Stamm L, Weinstock K, Fechtel K, Weiss RB, Dunn DM, Green ED, Blakesley RW, Bouffard GG, De Jong PJ, Osoegawa K, Zhu B, Marra M, Schein J, Bosdet I, Fjell C, Jones S, Krzywinski M, Mathewson C, Siddiqui A, Wye N, McPherson J, Zhao S, Fraser CM, Shetty J, Shatsman S, Geer K, Chen Y, Abramzon S, Nierman WC, Havlak PH, Chen R, Durbin KJ, Simons R, Ren Y, Song XZ, Li B, Liu Y, Qin X, Cawley S, Worley KC, Cooney AJ, D'Souza LM, Martin K, Wu JQ, Gonzalez-Garay ML, Jackson AR, Kalafus KJ, McLeod MP, Milosavljevic A, Virk D, Volkov A, Wheeler DA, Zhang Z, Bailey JA, Eichler EE, Tuzun E, Birney E, Mongin E, Ureta-Vidal A, Woodwark C, Zdobnov E, Bork P, Suyama M, Torrents D, Alexandersson M, Trask BJ, Young JM, H… See abstract for full author list ➔ Gibbs RA, et al. Among authors: twigger s. Nature. 2004 Apr 1;428(6982):493-521. doi: 10.1038/nature02426. Nature. 2004. PMID: 15057822
What everybody should know about the rat genome and its online resources.
Twigger SN, Pruitt KD, Fernández-Suárez XM, Karolchik D, Worley KC, Maglott DR, Brown G, Weinstock G, Gibbs RA, Kent J, Birney E, Jacob HJ. Twigger SN, et al. Nat Genet. 2008 May;40(5):523-7. doi: 10.1038/ng0508-523. Nat Genet. 2008. PMID: 18443589 Free PMC article.
Phylogenetics of rat inbred strains.
Thomas MA, Chen CF, Jensen-Seaman MI, Tonellato PJ, Twigger SN. Thomas MA, et al. Mamm Genome. 2003 Jan;14(1):61-4. doi: 10.1007/s00335-002-2204-5. Mamm Genome. 2003. PMID: 12532268 No abstract available.
Tools and strategies for physiological genomics: the Rat Genome Database.
Twigger SN, Pasko D, Nie J, Shimoyama M, Bromberg S, Campbell D, Chen J, dela Cruz N, Fan C, Foote C, Harris G, Hickmann B, Ji Y, Jin W, Li D, Mathis J, Nenasheva N, Nigam R, Petri V, Reilly D, Ruotti V, Schauberger E, Seiler K, Slyper R, Smith J, Wang W, Wu W, Zhao L, Zuniga-Meyer A, Tonellato PJ, Kwitek AE, Jacob HJ. Twigger SN, et al. Physiol Genomics. 2005 Oct 17;23(2):246-56. doi: 10.1152/physiolgenomics.00040.2005. Epub 2005 Aug 16. Physiol Genomics. 2005. PMID: 16106031 Free PMC article.
Exploring phenotypic data at the rat genome database.
Twigger SN, S Smith J, Zuniga-Meyer A, Bromberg SK. Twigger SN, et al. Among authors: s smith j. Curr Protoc Bioinformatics. 2006 Jul;Chapter 1:Unit 1.14. doi: 10.1002/0471250953.bi0114s14. Curr Protoc Bioinformatics. 2006. PMID: 18428755
Rat Genome Database (RGD): mapping disease onto the genome.
Twigger S, Lu J, Shimoyama M, Chen D, Pasko D, Long H, Ginster J, Chen CF, Nigam R, Kwitek A, Eppig J, Maltais L, Maglott D, Schuler G, Jacob H, Tonellato PJ. Twigger S, et al. Nucleic Acids Res. 2002 Jan 1;30(1):125-8. doi: 10.1093/nar/30.1.125. Nucleic Acids Res. 2002. PMID: 11752273 Free PMC article.
The Rat Genome Database (RGD): developments towards a phenome database.
de la Cruz N, Bromberg S, Pasko D, Shimoyama M, Twigger S, Chen J, Chen CF, Fan C, Foote C, Gopinath GR, Harris G, Hughes A, Ji Y, Jin W, Li D, Mathis J, Nenasheva N, Nie J, Nigam R, Petri V, Reilly D, Wang W, Wu W, Zuniga-Meyer A, Zhao L, Kwitek A, Tonellato P, Jacob H. de la Cruz N, et al. Among authors: twigger s. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D485-91. doi: 10.1093/nar/gki050. Nucleic Acids Res. 2005. PMID: 15608243 Free PMC article.
High-throughput scanning of the rat genome using interspersed repetitive sequence-PCR markers.
Gösele C, Hong L, Kreitler T, Rossmann M, Hieke B, Gross U, Kramer M, Himmelbauer H, Bihoreau MT, Kwitek-Black AE, Twigger S, Tonellato PJ, Jacob HJ, Schalkwyk LC, Lindpaintner K, Ganten D, Lehrach H, Knoblauch M. Gösele C, et al. Among authors: twigger s. Genomics. 2000 Nov 1;69(3):287-94. doi: 10.1006/geno.2000.6352. Genomics. 2000. PMID: 11056046
46 results