Brunak S - Search Results

1

Identification of phosphorylation sites in protein kinase A substrates using artificial neural networks and mass spectrometry.

Hjerrild M, Stensballe A, Rasmussen TE, Kofoed CB, Blom N, Sicheritz-Ponten T, Larsen MR, Brunak S, Jensen ON, Gammeltoft S. Hjerrild M, et al. Among authors: brunak s. J Proteome Res. 2004 May-Jun;3(3):426-33. doi: 10.1021/pr0341033. J Proteome Res. 2004. PMID: 15253423

2

Prediction of proprotein convertase cleavage sites.

Duckert P, Brunak S, Blom N. Duckert P, et al. Among authors: brunak s. Protein Eng Des Sel. 2004 Jan;17(1):107-12. doi: 10.1093/protein/gzh013. Protein Eng Des Sel. 2004. PMID: 14985543

3

Feature-based prediction of non-classical and leaderless protein secretion.

Bendtsen JD, Jensen LJ, Blom N, Von Heijne G, Brunak S. Bendtsen JD, et al. Among authors: brunak s. Protein Eng Des Sel. 2004 Apr;17(4):349-56. doi: 10.1093/protein/gzh037. Epub 2004 Apr 28. Protein Eng Des Sel. 2004. PMID: 15115854

4

Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence.

Blom N, Sicheritz-Pontén T, Gupta R, Gammeltoft S, Brunak S. Blom N, et al. Among authors: brunak s. Proteomics. 2004 Jun;4(6):1633-49. doi: 10.1002/pmic.200300771. Proteomics. 2004. PMID: 15174133 Review.

5

Coronavirus 3CLpro proteinase cleavage sites: possible relevance to SARS virus pathology.

Kiemer L, Lund O, Brunak S, Blom N. Kiemer L, et al. Among authors: brunak s. BMC Bioinformatics. 2004 Jun 6;5:72. doi: 10.1186/1471-2105-5-72. BMC Bioinformatics. 2004. PMID: 15180906 Free PMC article.

6

Motif decomposition of the phosphotyrosine proteome reveals a new N-terminal binding motif for SHIP2.

Miller ML, Hanke S, Hinsby AM, Friis C, Brunak S, Mann M, Blom N. Miller ML, et al. Among authors: brunak s. Mol Cell Proteomics. 2008 Jan;7(1):181-92. doi: 10.1074/mcp.M700241-MCP200. Mol Cell Proteomics. 2008. PMID: 17938406 Free article.

7

Linear motif atlas for phosphorylation-dependent signaling.

Miller ML, Jensen LJ, Diella F, Jørgensen C, Tinti M, Li L, Hsiung M, Parker SA, Bordeaux J, Sicheritz-Ponten T, Olhovsky M, Pasculescu A, Alexander J, Knapp S, Blom N, Bork P, Li S, Cesareni G, Pawson T, Turk BE, Yaffe MB, Brunak S, Linding R. Miller ML, et al. Among authors: brunak s. Sci Signal. 2008 Sep 2;1(35):ra2. doi: 10.1126/scisignal.1159433. Sci Signal. 2008. PMID: 18765831 Free PMC article.

8

Cofactory: sequence-based prediction of cofactor specificity of Rossmann folds.

Geertz-Hansen HM, Blom N, Feist AM, Brunak S, Petersen TN. Geertz-Hansen HM, et al. Among authors: brunak s. Proteins. 2014 Sep;82(9):1819-28. doi: 10.1002/prot.24536. Epub 2014 Mar 20. Proteins. 2014. PMID: 24523134

9

Bacterial diversity in snow on North Pole ice floes.

Hauptmann AL, Stibal M, Bælum J, Sicheritz-Pontén T, Brunak S, Bowman JS, Hansen LH, Jacobsen CS, Blom N. Hauptmann AL, et al. Among authors: brunak s. Extremophiles. 2014 Nov;18(6):945-51. doi: 10.1007/s00792-014-0660-y. Epub 2014 Jun 21. Extremophiles. 2014. PMID: 24951969 Free PMC article.

10

Protein features as determinants of wild-type glycoside hydrolase thermostability.

Geertz-Hansen HM, Kiemer L, Nielsen M, Stanchev K, Blom N, Brunak S, Petersen TN. Geertz-Hansen HM, et al. Among authors: brunak s. Proteins. 2017 Nov;85(11):2036-2044. doi: 10.1002/prot.25357. Epub 2017 Aug 10. Proteins. 2017. PMID: 28734034 Free article.

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