Zhang Y - Search Results

1

The interactome as a tree--an attempt to visualize the protein-protein interaction network in yeast.

Lu H, Zhu X, Liu H, Skogerbø G, Zhang J, Zhang Y, Cai L, Zhao Y, Sun S, Xu J, Bu D, Chen R. Lu H, et al. Among authors: zhang j, zhang y. Nucleic Acids Res. 2004 Sep 8;32(16):4804-11. doi: 10.1093/nar/gkh814. Print 2004. Nucleic Acids Res. 2004. PMID: 15356297 Free PMC article.

2

NPInter: the noncoding RNAs and protein related biomacromolecules interaction database.

Wu T, Wang J, Liu C, Zhang Y, Shi B, Zhu X, Zhang Z, Skogerbø G, Chen L, Lu H, Zhao Y, Chen R. Wu T, et al. Among authors: zhang z, zhang y. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D150-2. doi: 10.1093/nar/gkj025. Nucleic Acids Res. 2006. PMID: 16381834 Free PMC article.

3

Faster and more accurate global protein function assignment from protein interaction networks using the MFGO algorithm.

Sun S, Zhao Y, Jiao Y, Yin Y, Cai L, Zhang Y, Lu H, Chen R, Bu D. Sun S, et al. Among authors: zhang y. FEBS Lett. 2006 Mar 20;580(7):1891-6. doi: 10.1016/j.febslet.2006.02.053. Epub 2006 Feb 28. FEBS Lett. 2006. PMID: 16516894 Free article.

4

Integrated analysis of multiple data sources reveals modular structure of biological networks.

Lu H, Shi B, Wu G, Zhang Y, Zhu X, Zhang Z, Liu C, Zhao Y, Wu T, Wang J, Chen R. Lu H, et al. Among authors: zhang z, zhang y. Biochem Biophys Res Commun. 2006 Jun 23;345(1):302-9. doi: 10.1016/j.bbrc.2006.04.088. Epub 2006 Apr 27. Biochem Biophys Res Commun. 2006. PMID: 16690033

5

NONCODE: an integrated knowledge database of non-coding RNAs.

Liu C, Bai B, Skogerbø G, Cai L, Deng W, Zhang Y, Bu D, Zhao Y, Chen R. Liu C, et al. Among authors: zhang y. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D112-5. doi: 10.1093/nar/gki041. Nucleic Acids Res. 2005. PMID: 15608158 Free PMC article.

6

Phylophenetic properties of metabolic pathway topologies as revealed by global analysis.

Zhang Y, Li S, Skogerbø G, Zhang Z, Zhu X, Zhang Z, Sun S, Lu H, Shi B, Chen R. Zhang Y, et al. Among authors: zhang z. BMC Bioinformatics. 2006 May 9;7:252. doi: 10.1186/1471-2105-7-252. BMC Bioinformatics. 2006. PMID: 16684350 Free PMC article.

7

Dynamic changes in subgraph preference profiles of crucial transcription factors.

Zhang Z, Liu C, Skogerbø G, Zhu X, Lu H, Chen L, Shi B, Zhang Y, Wang J, Wu T, Chen R. Zhang Z, et al. Among authors: zhang y. PLoS Comput Biol. 2006 May;2(5):e47. doi: 10.1371/journal.pcbi.0020047. Epub 2006 May 12. PLoS Comput Biol. 2006. PMID: 16699597 Free PMC article.

8

Systematic identification and characterization of chicken (Gallus gallus) ncRNAs.

Zhang Y, Wang J, Huang S, Zhu X, Liu J, Yang N, Song D, Wu R, Deng W, Skogerbø G, Wang XJ, Chen R, Zhu D. Zhang Y, et al. Nucleic Acids Res. 2009 Oct;37(19):6562-74. doi: 10.1093/nar/gkp704. Epub 2009 Aug 31. Nucleic Acids Res. 2009. PMID: 19720738 Free PMC article.

9

Identifying Hfq-binding small RNA targets in Escherichia coli.

Zhang Y, Sun S, Wu T, Wang J, Liu C, Chen L, Zhu X, Zhao Y, Zhang Z, Shi B, Lu H, Chen R. Zhang Y, et al. Among authors: zhang z. Biochem Biophys Res Commun. 2006 May 12;343(3):950-5. doi: 10.1016/j.bbrc.2006.02.196. Epub 2006 Mar 20. Biochem Biophys Res Commun. 2006. PMID: 16574072

10

Genome-wide analysis of mammalian DNA segment fusion/fission.

Zhang Z, Sun H, Zhang Y, Zhao Y, Shi B, Sun S, Lu H, Bu D, Ling L, Chen R. Zhang Z, et al. Among authors: zhang y. J Theor Biol. 2006 May 21;240(2):200-8. doi: 10.1016/j.jtbi.2005.09.016. Epub 2005 Nov 14. J Theor Biol. 2006. PMID: 16289610

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