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Development of an expressed sequence tag (EST) resource for wheat (Triticum aestivum L.): EST generation, unigene analysis, probe selection and bioinformatics for a 16,000-locus bin-delineated map.
Lazo GR, Chao S, Hummel DD, Edwards H, Crossman CC, Lui N, Matthews DE, Carollo VL, Hane DL, You FM, Butler GE, Miller RE, Close TJ, Peng JH, Lapitan NL, Gustafson JP, Qi LL, Echalier B, Gill BS, Dilbirligi M, Randhawa HS, Gill KS, Greene RA, Sorrells ME, Akhunov ED, Dvorák J, Linkiewicz AM, Dubcovsky J, Hossain KG, Kalavacharla V, Kianian SF, Mahmoud AA, Miftahudin, Ma XF, Conley EJ, Anderson JA, Pathan MS, Nguyen HT, McGuire PE, Qualset CO, Anderson OD. Lazo GR, et al. Among authors: matthews de. Genetics. 2004 Oct;168(2):585-93. doi: 10.1534/genetics.104.034777. Genetics. 2004. PMID: 15514037 Free PMC article.
Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.
Munkvold JD, Greene RA, Bermudez-Kandianis CE, La Rota CM, Edwards H, Sorrells SF, Dake T, Benscher D, Kantety R, Linkiewicz AM, Dubcovsky J, Akhunov ED, Dvorák J, Miftahudin, Gustafson JP, Pathan MS, Nguyen HT, Matthews DE, Chao S, Lazo GR, Hummel DD, Anderson OD, Anderson JA, Gonzalez-Hernandez JL, Peng JH, Lapitan N, Qi LL, Echalier B, Gill BS, Hossain KG, Kalavacharla V, Kianian SF, Sandhu D, Erayman M, Gill KS, McGuire PE, Qualset CO, Sorrells ME. Munkvold JD, et al. Among authors: matthews de. Genetics. 2004 Oct;168(2):639-50. doi: 10.1534/genetics.104.034819. Genetics. 2004. PMID: 15514041 Free PMC article.
Comparative DNA sequence analysis of wheat and rice genomes.
Sorrells ME, La Rota M, Bermudez-Kandianis CE, Greene RA, Kantety R, Munkvold JD, Miftahudin, Mahmoud A, Ma X, Gustafson PJ, Qi LL, Echalier B, Gill BS, Matthews DE, Lazo GR, Chao S, Anderson OD, Edwards H, Linkiewicz AM, Dubcovsky J, Akhunov ED, Dvorak J, Zhang D, Nguyen HT, Peng J, Lapitan NL, Gonzalez-Hernandez JL, Anderson JA, Hossain K, Kalavacharla V, Kianian SF, Choi DW, Close TJ, Dilbirligi M, Gill KS, Steber C, Walker-Simmons MK, McGuire PE, Qualset CO. Sorrells ME, et al. Among authors: matthews de. Genome Res. 2003 Aug;13(8):1818-27. doi: 10.1101/gr.1113003. Genome Res. 2003. PMID: 12902377 Free PMC article.
GrainGenes 2.0. an improved resource for the small-grains community.
Carollo V, Matthews DE, Lazo GR, Blake TK, Hummel DD, Lui N, Hane DL, Anderson OD. Carollo V, et al. Among authors: matthews de. Plant Physiol. 2005 Oct;139(2):643-51. doi: 10.1104/pp.105.064485. Plant Physiol. 2005. PMID: 16219925 Free PMC article.
Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes.
Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Deal KR, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo H, Huo N, Lazo GR, Luo MC, Ma YQ, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J. Akhunov ED, et al. Among authors: matthews de. BMC Genomics. 2010 Dec 14;11:702. doi: 10.1186/1471-2164-11-702. BMC Genomics. 2010. PMID: 21156062 Free PMC article.
GrainGenes, the genome database for small-grain crops.
Matthews DE, Carollo VL, Lazo GR, Anderson OD. Matthews DE, et al. Nucleic Acids Res. 2003 Jan 1;31(1):183-6. doi: 10.1093/nar/gkg058. Nucleic Acids Res. 2003. PMID: 12519977 Free PMC article.
Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae.
Luo MC, Deal KR, Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo HY, Huo N, Lazo G, Ma Y, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J. Luo MC, et al. Among authors: matthews de. Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15780-5. doi: 10.1073/pnas.0908195106. Epub 2009 Aug 26. Proc Natl Acad Sci U S A. 2009. PMID: 19717446 Free PMC article.
Plant and crop databases.
Matthews DE, Lazo GR, Anderson OD. Matthews DE, et al. Methods Mol Biol. 2009;513:243-62. doi: 10.1007/978-1-59745-427-8_13. Methods Mol Biol. 2009. PMID: 19347656 Review.
250 results