van de Wiel MA - Search Results

1

Microarray data analysis: from hypotheses to conclusions using gene expression data.

Armstrong NJ, van de Wiel MA. Armstrong NJ, et al. Among authors: van de wiel ma. Cell Oncol. 2004;26(5-6):279-90. doi: 10.1155/2004/943940. Cell Oncol. 2004. PMID: 15623938 Free PMC article. Review.

2

Estimating the false discovery rate using nonparametric deconvolution.

van de Wiel MA, Kim KI. van de Wiel MA, et al. Biometrics. 2007 Sep;63(3):806-15. doi: 10.1111/j.1541-0420.2006.00736.x. Biometrics. 2007. PMID: 17825012

3

Weighted clustering of called array CGH data.

Van Wieringen WN, Van De Wiel MA, Ylstra B. Van Wieringen WN, et al. Among authors: van de wiel ma. Biostatistics. 2008 Jul;9(3):484-500. doi: 10.1093/biostatistics/kxm048. Epub 2007 Dec 22. Biostatistics. 2008. PMID: 18156651

4

MLPAnalyzer: data analysis tool for reliable automated normalization of MLPA fragment data.

Coffa J, van de Wiel MA, Diosdado B, Carvalho B, Schouten J, Meijer GA. Coffa J, et al. Among authors: van de wiel ma. Cell Oncol. 2008;30(4):323-35. doi: 10.3233/clo-2008-0428. Cell Oncol. 2008. PMID: 18607067 Free PMC article.

5

Pla2g2a attenuates colon tumorigenesis in azoxymethane-treated C57BL/6 mice; expression studies reveal Pla2g2a target genes and pathways.

Fijneman RJ, Bade LK, Peham JR, van de Wiel MA, van Hinsbergh VW, Meijer GA, O'Sullivan MG, Cormier RT. Fijneman RJ, et al. Among authors: van hinsbergh vw, van de wiel ma. Cell Oncol. 2009;31(5):345-56. doi: 10.3233/CLO-2009-0480. Cell Oncol. 2009. PMID: 19759415 Free PMC article.

6

Intensity-based analysis of dual-color gene expression data as an alternative to ratio-based analysis to enhance reproducibility.

Bossers K, Ylstra B, Brakenhoff RH, Smeets SJ, Verhaagen J, van de Wiel MA. Bossers K, et al. Among authors: van de wiel ma. BMC Genomics. 2010 Feb 17;11:112. doi: 10.1186/1471-2164-11-112. BMC Genomics. 2010. PMID: 20163706 Free PMC article.

7

Preprocessing and downstream analysis of microarray DNA copy number profiles.

van de Wiel MA, Picard F, van Wieringen WN, Ylstra B. van de Wiel MA, et al. Among authors: van wieringen wn. Brief Bioinform. 2011 Jan;12(1):10-21. doi: 10.1093/bib/bbq004. Epub 2010 Feb 19. Brief Bioinform. 2011. PMID: 20172948 Review.

8

Exploratory factor analysis of pathway copy number data with an application towards the integration with gene expression data.

van Wieringen WN, van de Wiel MA. van Wieringen WN, et al. Among authors: van de wiel ma. J Comput Biol. 2011 May;18(5):729-41. doi: 10.1089/cmb.2009.0209. J Comput Biol. 2011. PMID: 21554018

9

Colorectal adenoma to carcinoma progression is accompanied by changes in gene expression associated with ageing, chromosomal instability, and fatty acid metabolism.

Carvalho B, Sillars-Hardebol AH, Postma C, Mongera S, Terhaar Sive Droste J, Obulkasim A, van de Wiel M, van Criekinge W, Ylstra B, Fijneman RJ, Meijer GA. Carvalho B, et al. Cell Oncol (Dordr). 2012 Feb;35(1):53-63. doi: 10.1007/s13402-011-0065-1. Epub 2012 Jan 26. Cell Oncol (Dordr). 2012. PMID: 22278361 Free PMC article.

10

Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses.

van Wieringen WN, Unger K, Leday GG, Krijgsman O, de Menezes RX, Ylstra B, van de Wiel MA. van Wieringen WN, et al. Among authors: de menezes rx, van de wiel ma. BMC Bioinformatics. 2012 May 4;13:80. doi: 10.1186/1471-2105-13-80. BMC Bioinformatics. 2012. PMID: 22559006 Free PMC article.

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