Urakawa H - Search Results

1

DNA microarray detection of nitrifying bacterial 16S rRNA in wastewater treatment plant samples.

Kelly JJ, Siripong S, McCormack J, Janus LR, Urakawa H, El Fantroussi S, Noble PA, Sappelsa L, Rittmann BE, Stahl DA. Kelly JJ, et al. Among authors: urakawa h. Water Res. 2005 Sep;39(14):3229-38. doi: 10.1016/j.watres.2005.05.044. Water Res. 2005. PMID: 16009395

2

Single-base-pair discrimination of terminal mismatches by using oligonucleotide microarrays and neural network analyses.

Urakawa H, Noble PA, El Fantroussi S, Kelly JJ, Stahl DA. Urakawa H, et al. Appl Environ Microbiol. 2002 Jan;68(1):235-44. doi: 10.1128/AEM.68.1.235-244.2002. Appl Environ Microbiol. 2002. PMID: 11772632 Free PMC article.

3

Parallel characterization of anaerobic toluene- and ethylbenzene-degrading microbial consortia by PCR-denaturing gradient gel electrophoresis, RNA-DNA membrane hybridization, and DNA microarray technology.

Koizumi Y, Kelly JJ, Nakagawa T, Urakawa H, El-Fantroussi S, Al-Muzaini S, Fukui M, Urushigawa Y, Stahl DA. Koizumi Y, et al. Among authors: urakawa h. Appl Environ Microbiol. 2002 Jul;68(7):3215-25. doi: 10.1128/AEM.68.7.3215-3225.2002. Appl Environ Microbiol. 2002. PMID: 12088997 Free PMC article.

4

Direct profiling of environmental microbial populations by thermal dissociation analysis of native rRNAs hybridized to oligonucleotide microarrays.

El Fantroussi S, Urakawa H, Bernhard AE, Kelly JJ, Noble PA, Smidt H, Yershov GM, Stahl DA. El Fantroussi S, et al. Among authors: urakawa h. Appl Environ Microbiol. 2003 Apr;69(4):2377-82. doi: 10.1128/AEM.69.4.2377-2382.2003. Appl Environ Microbiol. 2003. PMID: 12676724 Free PMC article.

5

Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays.

Urakawa H, El Fantroussi S, Smidt H, Smoot JC, Tribou EH, Kelly JJ, Noble PA, Stahl DA. Urakawa H, et al. Appl Environ Microbiol. 2003 May;69(5):2848-56. doi: 10.1128/AEM.69.5.2848-2856.2003. Appl Environ Microbiol. 2003. PMID: 12732557 Free PMC article.

6

Hydrothermal vent gastropods from the same family (Provannidae) harbour epsilon- and gamma-proteobacterial endosymbionts.

Urakawa H, Dubilier N, Fujiwara Y, Cunningham DE, Kojima S, Stahl DA. Urakawa H, et al. Environ Microbiol. 2005 May;7(5):750-4. doi: 10.1111/j.1462-2920.2005.00753.x. Environ Microbiol. 2005. PMID: 15819856

7

Discrimination of shifts in a soil microbial community associated with TNT-contamination using a functional ANOVA of 16S rRNA hybridized to oligonucleotide microarrays.

Eyers L, Smoot JC, Smoot LM, Bugli C, Urakawa H, McMurry Z, Siripong S, El-Fantroussi S, Lambert P, Agathos SN, Stahl DA. Eyers L, et al. Among authors: urakawa h. Environ Sci Technol. 2006 Oct 1;40(19):5867-73. doi: 10.1021/es0609093. Environ Sci Technol. 2006. PMID: 17051772

8

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria.

Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA. Martens-Habbena W, et al. Among authors: urakawa h. Nature. 2009 Oct 15;461(7266):976-9. doi: 10.1038/nature08465. Epub 2009 Sep 30. Nature. 2009. PMID: 19794413

9

High abundance of ammonia-oxidizing Archaea in coastal waters, determined using a modified DNA extraction method.

Urakawa H, Martens-Habbena W, Stahl DA. Urakawa H, et al. Appl Environ Microbiol. 2010 Apr;76(7):2129-35. doi: 10.1128/AEM.02692-09. Epub 2010 Jan 29. Appl Environ Microbiol. 2010. PMID: 20118363 Free PMC article.

10

Nitrosospira lacus sp. nov., a psychrotolerant, ammonia-oxidizing bacterium from sandy lake sediment.

Urakawa H, Garcia JC, Nielsen JL, Le VQ, Kozlowski JA, Stein LY, Lim CK, Pommerening-Röser A, Martens-Habbena W, Stahl DA, Klotz MG. Urakawa H, et al. Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):242-250. doi: 10.1099/ijs.0.070789-0. Epub 2014 Oct 21. Int J Syst Evol Microbiol. 2015. PMID: 25336720

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