Bailey DK - Search Results

1

A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays.

Nannya Y, Sanada M, Nakazaki K, Hosoya N, Wang L, Hangaishi A, Kurokawa M, Chiba S, Bailey DK, Kennedy GC, Ogawa S. Nannya Y, et al. Among authors: bailey dk. Cancer Res. 2005 Jul 15;65(14):6071-9. doi: 10.1158/0008-5472.CAN-05-0465. Cancer Res. 2005. PMID: 16024607

2

Genome-wide, high-resolution detection of copy number, loss of heterozygosity, and genotypes from formalin-fixed, paraffin-embedded tumor tissue using microarrays.

Jacobs S, Thompson ER, Nannya Y, Yamamoto G, Pillai R, Ogawa S, Bailey DK, Campbell IG. Jacobs S, et al. Among authors: bailey dk. Cancer Res. 2007 Mar 15;67(6):2544-51. doi: 10.1158/0008-5472.CAN-06-3597. Cancer Res. 2007. PMID: 17363572

3

High-resolution identification of chromosomal abnormalities using oligonucleotide arrays containing 116,204 SNPs.

Slater HR, Bailey DK, Ren H, Cao M, Bell K, Nasioulas S, Henke R, Choo KH, Kennedy GC. Slater HR, et al. Among authors: bailey dk. Am J Hum Genet. 2005 Nov;77(5):709-26. doi: 10.1086/497343. Epub 2005 Sep 16. Am J Hum Genet. 2005. PMID: 16252233 Free PMC article.

4

Analysis of SNP content of 82 common copy-number polymorphisms from the Database of Genomic Variations.

Slater HR, Bailey DK, Ren H, Cao M, Bell K, Nasioulas S, Henke R, Choo KH, Kennedy GC. Slater HR, et al. Among authors: bailey dk. Am J Hum Genet. 2006 Apr;78(4):730-1. doi: 10.1086/502683. Am J Hum Genet. 2006. PMID: 16532405 Free PMC article. No abstract available.

5

Oligonucleotide microarray analysis of genomic imbalance in children with mental retardation.

Friedman JM, Baross A, Delaney AD, Ally A, Arbour L, Armstrong L, Asano J, Bailey DK, Barber S, Birch P, Brown-John M, Cao M, Chan S, Charest DL, Farnoud N, Fernandes N, Flibotte S, Go A, Gibson WT, Holt RA, Jones SJ, Kennedy GC, Krzywinski M, Langlois S, Li HI, McGillivray BC, Nayar T, Pugh TJ, Rajcan-Separovic E, Schein JE, Schnerch A, Siddiqui A, Van Allen MI, Wilson G, Yong SL, Zahir F, Eydoux P, Marra MA. Friedman JM, et al. Among authors: bailey dk. Am J Hum Genet. 2006 Sep;79(3):500-13. doi: 10.1086/507471. Epub 2006 Jul 25. Am J Hum Genet. 2006. PMID: 16909388 Free PMC article.

6

A whole genome long-range haplotype (WGLRH) test for detecting imprints of positive selection in human populations.

Zhang C, Bailey DK, Awad T, Liu G, Xing G, Cao M, Valmeekam V, Retief J, Matsuzaki H, Taub M, Seielstad M, Kennedy GC. Zhang C, et al. Among authors: bailey dk. Bioinformatics. 2006 Sep 1;22(17):2122-8. doi: 10.1093/bioinformatics/btl365. Epub 2006 Jul 15. Bioinformatics. 2006. PMID: 16845142

7

Comprehensive analysis of loss of heterozygosity events in glioblastoma using the 100K SNP mapping arrays and comparison with copy number abnormalities defined by BAC array comparative genomic hybridization.

Lo KC, Bailey D, Burkhardt T, Gardina P, Turpaz Y, Cowell JK. Lo KC, et al. Genes Chromosomes Cancer. 2008 Mar;47(3):221-37. doi: 10.1002/gcc.20524. Genes Chromosomes Cancer. 2008. PMID: 18050302

8

A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array.

Yu T, Ye H, Sun W, Li KC, Chen Z, Jacobs S, Bailey DK, Wong DT, Zhou X. Yu T, et al. Among authors: bailey dk. BMC Bioinformatics. 2007 May 3;8:145. doi: 10.1186/1471-2105-8-145. BMC Bioinformatics. 2007. PMID: 17477871 Free PMC article.

9

Overlay tool for aCGHViewer: an analysis module built for aCGHViewer used to perform comparisons of data derived from different microarray platforms.

Lo KC, Shankar G, Turpaz Y, Bailey D, Rossi MR, Burkhardt T, Liang P, Cowell JK. Lo KC, et al. Cancer Inform. 2007 Aug 8;3:307-19. Cancer Inform. 2007. PMID: 19455250 Free PMC article.

10

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution.

Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, Patel S, Long J, Stern D, Tammana H, Helt G, Sementchenko V, Piccolboni A, Bekiranov S, Bailey DK, Ganesh M, Ghosh S, Bell I, Gerhard DS, Gingeras TR. Cheng J, et al. Among authors: bailey dk. Science. 2005 May 20;308(5725):1149-54. doi: 10.1126/science.1108625. Epub 2005 Mar 24. Science. 2005. PMID: 15790807

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