Shiue L - Search Results

1

Detection and measurement of alternative splicing using splicing-sensitive microarrays.

Srinivasan K, Shiue L, Hayes JD, Centers R, Fitzwater S, Loewen R, Edmondson LR, Bryant J, Smith M, Rommelfanger C, Welch V, Clark TA, Sugnet CW, Howe KJ, Mandel-Gutfreund Y, Ares M Jr. Srinivasan K, et al. Among authors: shiue l. Methods. 2005 Dec;37(4):345-59. doi: 10.1016/j.ymeth.2005.09.007. Methods. 2005. PMID: 16314264

2

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay.

Ni JZ, Grate L, Donohue JP, Preston C, Nobida N, O'Brien G, Shiue L, Clark TA, Blume JE, Ares M Jr. Ni JZ, et al. Among authors: shiue l. Genes Dev. 2007 Mar 15;21(6):708-18. doi: 10.1101/gad.1525507. Genes Dev. 2007. PMID: 17369403 Free PMC article.

3

Exploring functional relationships between components of the gene expression machinery.

Burckin T, Nagel R, Mandel-Gutfreund Y, Shiue L, Clark TA, Chong JL, Chang TH, Squazzo S, Hartzog G, Ares M Jr. Burckin T, et al. Among authors: shiue l. Nat Struct Mol Biol. 2005 Feb;12(2):175-82. doi: 10.1038/nsmb891. Epub 2005 Jan 30. Nat Struct Mol Biol. 2005. PMID: 15702072

4

Cell type and culture condition-dependent alternative splicing in human breast cancer cells revealed by splicing-sensitive microarrays.

Li C, Kato M, Shiue L, Shively JE, Ares M Jr, Lin RJ. Li C, et al. Among authors: shiue l. Cancer Res. 2006 Feb 15;66(4):1990-9. doi: 10.1158/0008-5472.CAN-05-2593. Cancer Res. 2006. PMID: 16488998

5

Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy.

Du H, Cline MS, Osborne RJ, Tuttle DL, Clark TA, Donohue JP, Hall MP, Shiue L, Swanson MS, Thornton CA, Ares M Jr. Du H, et al. Among authors: shiue l. Nat Struct Mol Biol. 2010 Feb;17(2):187-93. doi: 10.1038/nsmb.1720. Epub 2010 Jan 24. Nat Struct Mol Biol. 2010. PMID: 20098426 Free PMC article.

6

A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons.

Boutz PL, Stoilov P, Li Q, Lin CH, Chawla G, Ostrow K, Shiue L, Ares M Jr, Black DL. Boutz PL, et al. Among authors: shiue l. Genes Dev. 2007 Jul 1;21(13):1636-52. doi: 10.1101/gad.1558107. Genes Dev. 2007. PMID: 17606642 Free PMC article.

7

Autogenous cross-regulation of Quaking mRNA processing and translation balances Quaking functions in splicing and translation.

Fagg WS, Liu N, Fair JH, Shiue L, Katzman S, Donohue JP, Ares M Jr. Fagg WS, et al. Among authors: shiue l. Genes Dev. 2017 Sep 15;31(18):1894-1909. doi: 10.1101/gad.302059.117. Epub 2017 Oct 11. Genes Dev. 2017. PMID: 29021242 Free PMC article.

8

Quaking and PTB control overlapping splicing regulatory networks during muscle cell differentiation.

Hall MP, Nagel RJ, Fagg WS, Shiue L, Cline MS, Perriman RJ, Donohue JP, Ares M Jr. Hall MP, et al. Among authors: shiue l. RNA. 2013 May;19(5):627-38. doi: 10.1261/rna.038422.113. Epub 2013 Mar 22. RNA. 2013. PMID: 23525800 Free PMC article.

9

Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae.

Munding EM, Igel AH, Shiue L, Dorighi KM, Treviño LR, Ares M Jr. Munding EM, et al. Among authors: shiue l. Genes Dev. 2010 Dec 1;24(23):2693-704. doi: 10.1101/gad.1977410. Genes Dev. 2010. PMID: 21123654 Free PMC article.

10

Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins.

Huelga SC, Vu AQ, Arnold JD, Liang TY, Liu PP, Yan BY, Donohue JP, Shiue L, Hoon S, Brenner S, Ares M Jr, Yeo GW. Huelga SC, et al. Among authors: shiue l. Cell Rep. 2012 Feb 23;1(2):167-78. doi: 10.1016/j.celrep.2012.02.001. Cell Rep. 2012. PMID: 22574288 Free PMC article.

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