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High-performance exact algorithms for motif search.
Rajasekaran S, Balla S, Huang CH, Thapar V, Gryk M, Maciejewski M, Schiller M. Rajasekaran S, et al. Among authors: schiller m. J Clin Monit Comput. 2005 Oct;19(4-5):319-28. doi: 10.1007/s10877-005-0677-y. J Clin Monit Comput. 2005. PMID: 16328946
Novel algorithms for LDD motif search.
Xiao P, Schiller M, Rajasekaran S. Xiao P, et al. Among authors: schiller m. BMC Genomics. 2019 Jun 6;20(Suppl 5):424. doi: 10.1186/s12864-019-5701-6. BMC Genomics. 2019. PMID: 31167665 Free PMC article.
Minimotif miner 2nd release: a database and web system for motif search.
Rajasekaran S, Balla S, Gradie P, Gryk MR, Kadaveru K, Kundeti V, Maciejewski MW, Mi T, Rubino N, Vyas J, Schiller MR. Rajasekaran S, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D185-90. doi: 10.1093/nar/gkn865. Epub 2008 Oct 31. Nucleic Acids Res. 2009. PMID: 18978024 Free PMC article.
A proposed syntax for Minimotif Semantics, version 1.
Vyas J, Nowling RJ, Maciejewski MW, Rajasekaran S, Gryk MR, Schiller MR. Vyas J, et al. BMC Genomics. 2009 Aug 5;10:360. doi: 10.1186/1471-2164-10-360. BMC Genomics. 2009. PMID: 19656396 Free PMC article.
Achieving high accuracy prediction of minimotifs.
Mi T, Rajasekaran S, Merlin JC, Gryk M, Schiller MR. Mi T, et al. Among authors: schiller mr. PLoS One. 2012;7(9):e45589. doi: 10.1371/journal.pone.0045589. Epub 2012 Sep 27. PLoS One. 2012. PMID: 23029121 Free PMC article.
Minimotif Miner: a tool for investigating protein function.
Balla S, Thapar V, Verma S, Luong T, Faghri T, Huang CH, Rajasekaran S, del Campo JJ, Shinn JH, Mohler WA, Maciejewski MW, Gryk MR, Piccirillo B, Schiller SR, Schiller MR. Balla S, et al. Nat Methods. 2006 Mar;3(3):175-7. doi: 10.1038/nmeth856. Nat Methods. 2006. PMID: 16489333
MimoSA: a system for minimotif annotation.
Vyas J, Nowling RJ, Meusburger T, Sargeant D, Kadaveru K, Gryk MR, Kundeti V, Rajasekaran S, Schiller MR. Vyas J, et al. BMC Bioinformatics. 2010 Jun 16;11:328. doi: 10.1186/1471-2105-11-328. BMC Bioinformatics. 2010. PMID: 20565705 Free PMC article.
747 results