Simon R - Search Results

1

Aneuploidy-dependent massive deregulation of the cellular transcriptome and apparent divergence of the Wnt/beta-catenin signaling pathway in human rectal carcinomas.

Grade M, Ghadimi BM, Varma S, Simon R, Wangsa D, Barenboim-Stapleton L, Liersch T, Becker H, Ried T, Difilippantonio MJ. Grade M, et al. Among authors: simon r. Cancer Res. 2006 Jan 1;66(1):267-82. doi: 10.1158/0008-5472.CAN-05-2533. Cancer Res. 2006. PMID: 16397240 Free PMC article.

2

Gene expression profiling reveals a massive, aneuploidy-dependent transcriptional deregulation and distinct differences between lymph node-negative and lymph node-positive colon carcinomas.

Grade M, Hörmann P, Becker S, Hummon AB, Wangsa D, Varma S, Simon R, Liersch T, Becker H, Difilippantonio MJ, Ghadimi BM, Ried T. Grade M, et al. Among authors: simon r. Cancer Res. 2007 Jan 1;67(1):41-56. doi: 10.1158/0008-5472.CAN-06-1514. Cancer Res. 2007. PMID: 17210682 Free PMC article.

3

Effectiveness of gene expression profiling for response prediction of rectal adenocarcinomas to preoperative chemoradiotherapy.

Ghadimi BM, Grade M, Difilippantonio MJ, Varma S, Simon R, Montagna C, Füzesi L, Langer C, Becker H, Liersch T, Ried T. Ghadimi BM, et al. Among authors: simon r. J Clin Oncol. 2005 Mar 20;23(9):1826-38. doi: 10.1200/JCO.2005.00.406. J Clin Oncol. 2005. PMID: 15774776 Free PMC article. Clinical Trial.

4

Iterative class discovery and feature selection using Minimal Spanning Trees.

Varma S, Simon R. Varma S, et al. Among authors: simon r. BMC Bioinformatics. 2004 Sep 8;5:126. doi: 10.1186/1471-2105-5-126. BMC Bioinformatics. 2004. PMID: 15355552 Free PMC article.

5

Bias in error estimation when using cross-validation for model selection.

Varma S, Simon R. Varma S, et al. Among authors: simon r. BMC Bioinformatics. 2006 Feb 23;7:91. doi: 10.1186/1471-2105-7-91. BMC Bioinformatics. 2006. PMID: 16504092 Free PMC article.

6

Calculating confidence intervals for prediction error in microarray classification using resampling.

Jiang W, Varma S, Simon R. Jiang W, et al. Among authors: simon r. Stat Appl Genet Mol Biol. 2008;7(1):Article8. doi: 10.2202/1544-6115.1322. Epub 2008 Mar 1. Stat Appl Genet Mol Biol. 2008. PMID: 18312213

7

Length and loss of heterozygosity of an intron 1 polymorphic sequence of egfr is related to cytogenetic alterations and epithelial growth factor receptor expression.

Buerger H, Gebhardt F, Schmidt H, Beckmann A, Hutmacher K, Simon R, Lelle R, Boecker W, Brandt B. Buerger H, et al. Among authors: simon r. Cancer Res. 2000 Feb 15;60(4):854-7. Cancer Res. 2000. PMID: 10706093

8

Cytogenetic analysis of multifocal bladder cancer supports a monoclonal origin and intraepithelial spread of tumor cells.

Simon R, Eltze E, Schäfer KL, Bürger H, Semjonow A, Hertle L, Dockhorn-Dworniczak B, Terpe HJ, Böcker W. Simon R, et al. Cancer Res. 2001 Jan 1;61(1):355-62. Cancer Res. 2001. PMID: 11196186

9

Construct and Compare Gene Coexpression Networks with DAPfinder and DAPview.

Skinner J, Kotliarov Y, Varma S, Mine KL, Yambartsev A, Simon R, Huyen Y, Morgun A. Skinner J, et al. Among authors: simon r. BMC Bioinformatics. 2011 Jul 14;12:286. doi: 10.1186/1471-2105-12-286. BMC Bioinformatics. 2011. PMID: 21756334 Free PMC article.

10

Combined breast ductal lavage and ductal endoscopy for the evaluation of the high-risk breast: a feasibility study.

Danforth DN Jr, Abati A, Filie A, Prindiville SA, Palmieri D, Simon R, Ried T, Steeg PS. Danforth DN Jr, et al. Among authors: simon r. J Surg Oncol. 2006 Dec 1;94(7):555-64. doi: 10.1002/jso.20650. J Surg Oncol. 2006. PMID: 17048242 Clinical Trial.

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