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Page 1
Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems.
Denoeud F, Godfroy O, Cruaud C, Heesch S, Nehr Z, Tadrent N, Couloux A, Brillet-Guéguen L, Delage L, Mckeown D, Motomura T, Sussfeld D, Fan X, Mazéas L, Terrapon N, Barrera-Redondo J, Petroll R, Reynes L, Choi SW, Jo J, Uthanumallian K, Bogaert K, Duc C, Ratchinski P, Lipinska A, Noel B, Murphy EA, Lohr M, Khatei A, Hamon-Giraud P, Vieira C, Avia K, Akerfors SS, Akita S, Badis Y, Barbeyron T, Belcour A, Berrabah W, Blanquart S, Bouguerba-Collin A, Bringloe T, Cattolico RA, Cormier A, Cruz de Carvalho H, Dallet R, De Clerck O, Debit A, Denis E, Destombe C, Dinatale E, Dittami S, Drula E, Faugeron S, Got J, Graf L, Groisillier A, Guillemin ML, Harms L, Hatchett WJ, Henrissat B, Hoarau G, Jollivet C, Jueterbock A, Kayal E, Knoll AH, Kogame K, Le Bars A, Leblanc C, Le Gall L, Ley R, Liu X, LoDuca ST, Lopez PJ, Lopez P, Manirakiza E, Massau K, Mauger S, Mest L, Michel G, Monteiro C, Nagasato C, Nègre D, Pelletier E, Phillips N, Potin P, Rensing SA, Rousselot E, Rousvoal S, Schroeder D, Scornet D, Siegel A, Tirichine L, Tonon T, Valentin K, Verbruggen H, Weinberger F, Wheeler G, Kawai H, Peters AF, Yoon HS, Hervé C, Ye N, Bapteste E, Valero M, Markov GV, Corre E, Coelho SM, Winck… See abstract for full author list ➔ Denoeud F, et al. Among authors: heesch s. Cell. 2024 Nov 27;187(24):6943-6965.e39. doi: 10.1016/j.cell.2024.10.049. Epub 2024 Nov 20. Cell. 2024. PMID: 39571576 Free article.
Evolution of translational control and the emergence of genes and open reading frames in human and non-human primate hearts.
Ruiz-Orera J, Miller DC, Greiner J, Genehr C, Grammatikaki A, Blachut S, Mbebi J, Patone G, Myronova A, Adami E, Dewani N, Liang N, Hummel O, Muecke MB, Hildebrandt TB, Fritsch G, Schrade L, Zimmermann WH, Kondova I, Diecke S, van Heesch S, Hübner N. Ruiz-Orera J, et al. Among authors: van heesch s. Nat Cardiovasc Res. 2024 Oct;3(10):1217-1235. doi: 10.1038/s44161-024-00544-7. Epub 2024 Sep 24. Nat Cardiovasc Res. 2024. PMID: 39317836 Free PMC article.
High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.
Deutsch EW, Kok LW, Mudge JM, Ruiz-Orera J, Fierro-Monti I, Sun Z, Abelin JG, Alba MM, Aspden JL, Bazzini AA, Bruford EA, Brunet MA, Calviello L, Carr SA, Carvunis AR, Chothani S, Clauwaert J, Dean K, Faridi P, Frankish A, Hubner N, Ingolia NT, Magrane M, Martin MJ, Martinez TF, Menschaert G, Ohler U, Orchard S, Rackham O, Roucou X, Slavoff SA, Valen E, Wacholder A, Weissman JS, Wu W, Xie Z, Choudhary J, Bassani-Sternberg M, Vizcaíno JA, Ternette N, Moritz RL, Prensner JR, van Heesch S. Deutsch EW, et al. Among authors: van heesch s. bioRxiv [Preprint]. 2024 Sep 9:2024.09.09.612016. doi: 10.1101/2024.09.09.612016. bioRxiv. 2024. PMID: 39314370 Free PMC article. Preprint.
The Neo-Open Reading Frame Peptides That Comprise the Tumor Framome Are a Rich Source of Neoantigens for Cancer Immunotherapy.
Martin MV, Aguilar-Rosas S, Franke K, Pieterse M, Langelaar JV, Schreurs R, Bijlsma MF, Besselink MG, Koster J, Timens W, Khasraw M, Ashley DM, Keir ST, Ottensmeier CH, King EV, Verheij J, Waasdorp C, Valk PJM, Engels SAG, Oostenbach E, van Dinter JT, Hofman DA, Mok JY, van Esch WJE, Wilmink H, Monkhorst K, Verheul HMW, Poel D, Hiltermann TJN, Kempen LCLTV, Groen HJM, Aerts JGJV, Heesch SV, Löwenberg B, Plasterk R, Kloosterman WP. Martin MV, et al. Among authors: heesch sv. Cancer Immunol Res. 2024 Jun 4;12(6):759-778. doi: 10.1158/2326-6066.CIR-23-0158. Cancer Immunol Res. 2024. PMID: 38573707
Targeting pediatric cancers via T-cell recognition of the monomorphic MHC class I-related protein MR1.
Cornel AM, van der Sman L, van Dinter JT, Arrabito M, Dunnebach E, van Hoesel M, Kluiver TA, Lopes AP, Dautzenberg NMM, Dekker L, van Rijn JM, van den Beemt DAMH, Buhl JL, du Chatinier A, Barneh F, Lu Y, Lo Nigro L, Krippner-Heidenreich A, Sebestyén Z, Kuball J, Hulleman E, Drost J, van Heesch S, Heidenreich OT, Peng WC, Nierkens S. Cornel AM, et al. Among authors: van heesch s. J Immunother Cancer. 2024 Mar 21;12(3):e007538. doi: 10.1136/jitc-2023-007538. J Immunother Cancer. 2024. PMID: 38519054 Free PMC article.
Translation of non-canonical open reading frames as a cancer cell survival mechanism in childhood medulloblastoma.
Hofman DA, Ruiz-Orera J, Yannuzzi I, Murugesan R, Brown A, Clauser KR, Condurat AL, van Dinter JT, Engels SAG, Goodale A, van der Lugt J, Abid T, Wang L, Zhou KN, Vogelzang J, Ligon KL, Phoenix TN, Roth JA, Root DE, Hubner N, Golub TR, Bandopadhayay P, van Heesch S, Prensner JR. Hofman DA, et al. Among authors: van heesch s. Mol Cell. 2024 Jan 18;84(2):261-276.e18. doi: 10.1016/j.molcel.2023.12.003. Epub 2024 Jan 3. Mol Cell. 2024. PMID: 38176414 Free article.
Multi-omics for studying and understanding polar life.
Clark MS, Hoffman JI, Peck LS, Bargelloni L, Gande D, Havermans C, Meyer B, Patarnello T, Phillips T, Stoof-Leichsenring KR, Vendrami DLJ, Beck A, Collins G, Friedrich MW, Halanych KM, Masello JF, Nagel R, Norén K, Printzen C, Ruiz MB, Wohlrab S, Becker B, Dumack K, Ghaderiardakani F, Glaser K, Heesch S, Held C, John U, Karsten U, Kempf S, Lucassen M, Paijmans A, Schimani K, Wallberg A, Wunder LC, Mock T. Clark MS, et al. Among authors: heesch s. Nat Commun. 2023 Nov 17;14(1):7451. doi: 10.1038/s41467-023-43209-y. Nat Commun. 2023. PMID: 37978186 Free PMC article. Review.
Editorial: Polar Genomics in a Changing World.
Hoffman JI, Heesch S, Clark MS. Hoffman JI, et al. Among authors: heesch s. Genes (Basel). 2023 Jul 3;14(7):1395. doi: 10.3390/genes14071395. Genes (Basel). 2023. PMID: 37510300 Free PMC article.
96 results