Kondrashov AS - Search Results

1

Analysis of internal loops within the RNA secondary structure in almost quadratic time.

Ogurtsov AY, Shabalina SA, Kondrashov AS, Roytberg MA. Ogurtsov AY, et al. Among authors: kondrashov as. Bioinformatics. 2006 Jun 1;22(11):1317-24. doi: 10.1093/bioinformatics/btl083. Epub 2006 Mar 16. Bioinformatics. 2006. PMID: 16543280

2

OWEN: aligning long collinear regions of genomes.

Ogurtsov AY, Roytberg MA, Shabalina SA, Kondrashov AS. Ogurtsov AY, et al. Among authors: kondrashov as. Bioinformatics. 2002 Dec;18(12):1703-4. doi: 10.1093/bioinformatics/18.12.1703. Bioinformatics. 2002. PMID: 12490463

3

Selective constraint in intergenic regions of human and mouse genomes.

Shabalina SA, Ogurtsov AY, Kondrashov VA, Kondrashov AS. Shabalina SA, et al. Among authors: kondrashov va, kondrashov as. Trends Genet. 2001 Jul;17(7):373-6. doi: 10.1016/s0168-9525(01)02344-7. Trends Genet. 2001. PMID: 11418197

4

Webb CT, Shabalina SA, Ogurtsov AY, Kondrashov AS. Webb CT, et al. Among authors: kondrashov as. Nucleic Acids Res. 2002 Mar 1;30(5):1233-9. doi: 10.1093/nar/30.5.1233. Nucleic Acids Res. 2002. PMID: 11861916 Free PMC article.

5

Classification of common conserved sequences in mammalian intergenic regions.

Kondrashov AS, Shabalina SA. Kondrashov AS, et al. Hum Mol Genet. 2002 Mar 15;11(6):669-74. doi: 10.1093/hmg/11.6.669. Hum Mol Genet. 2002. PMID: 11912182

6

A hierarchical approach to aligning collinear regions of genomes.

Roytberg MA, Ogurtsov AY, Shabalina SA, Kondrashov AS. Roytberg MA, et al. Among authors: kondrashov as. Bioinformatics. 2002 Dec;18(12):1673-80. doi: 10.1093/bioinformatics/18.12.1673. Bioinformatics. 2002. PMID: 12490453

7

Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3'UTRs.

Shabalina SA, Ogurtsov AY, Lipman DJ, Kondrashov AS. Shabalina SA, et al. Among authors: kondrashov as. Nucleic Acids Res. 2003 Sep 15;31(18):5433-9. doi: 10.1093/nar/gkg751. Nucleic Acids Res. 2003. PMID: 12954780 Free PMC article.

8

Bioinformatical assay of human gene morbidity.

Kondrashov FA, Ogurtsov AY, Kondrashov AS. Kondrashov FA, et al. Among authors: kondrashov as. Nucleic Acids Res. 2004 Mar 12;32(5):1731-7. doi: 10.1093/nar/gkh330. Print 2004. Nucleic Acids Res. 2004. PMID: 15020709 Free PMC article.

9

Indel-based evolutionary distance and mouse-human divergence.

Ogurtsov AY, Sunyaev S, Kondrashov AS. Ogurtsov AY, et al. Among authors: kondrashov as. Genome Res. 2004 Aug;14(8):1610-6. doi: 10.1101/gr.2450504. Genome Res. 2004. PMID: 15289479 Free PMC article.

10

SAMSON: a software package for the biopolymer primary structure analysis.

Nazipova NN, Shabalina SA, Ogurtsov AYu, Kondrashov AS, Roytberg MA, Buryakov GV, Vernoslov SE. Nazipova NN, et al. Among authors: kondrashov as. Comput Appl Biosci. 1995 Aug;11(4):423-6. doi: 10.1093/bioinformatics/11.4.423. Comput Appl Biosci. 1995. PMID: 8521051

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