Rattray M - Search Results

1

Propagating uncertainty in microarray data analysis.

Rattray M, Liu X, Sanguinetti G, Milo M, Lawrence ND. Rattray M, et al. Brief Bioinform. 2006 Mar;7(1):37-47. doi: 10.1093/bib/bbk003. Brief Bioinform. 2006. PMID: 16761363 Review.

2

Making sense of microarray data distributions.

Hoyle DC, Rattray M, Jupp R, Brass A. Hoyle DC, et al. Among authors: rattray m. Bioinformatics. 2002 Apr;18(4):576-84. doi: 10.1093/bioinformatics/18.4.576. Bioinformatics. 2002. PMID: 12016055

3

A model-based analysis of microarray experimental error and normalisation.

Fang Y, Brass A, Hoyle DC, Hayes A, Bashein A, Oliver SG, Waddington D, Rattray M. Fang Y, et al. Among authors: rattray m. Nucleic Acids Res. 2003 Aug 15;31(16):e96. doi: 10.1093/nar/gng097. Nucleic Acids Res. 2003. PMID: 12907748 Free PMC article.

4

A tractable probabilistic model for Affymetrix probe-level analysis across multiple chips.

Liu X, Milo M, Lawrence ND, Rattray M. Liu X, et al. Among authors: rattray m. Bioinformatics. 2005 Sep 15;21(18):3637-44. doi: 10.1093/bioinformatics/bti583. Epub 2005 Jul 14. Bioinformatics. 2005. PMID: 16020470

5

Accounting for probe-level noise in principal component analysis of microarray data.

Sanguinetti G, Milo M, Rattray M, Lawrence ND. Sanguinetti G, et al. Among authors: rattray m. Bioinformatics. 2005 Oct 1;21(19):3748-54. doi: 10.1093/bioinformatics/bti617. Epub 2005 Aug 9. Bioinformatics. 2005. PMID: 16091409

6

A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription.

Sanguinetti G, Rattray M, Lawrence ND. Sanguinetti G, et al. Among authors: rattray m. Bioinformatics. 2006 Jul 15;22(14):1753-9. doi: 10.1093/bioinformatics/btl154. Epub 2006 Apr 21. Bioinformatics. 2006. PMID: 16632490

7

Probe-level measurement error improves accuracy in detecting differential gene expression.

Liu X, Milo M, Lawrence ND, Rattray M. Liu X, et al. Among authors: rattray m. Bioinformatics. 2006 Sep 1;22(17):2107-13. doi: 10.1093/bioinformatics/btl361. Epub 2006 Jul 4. Bioinformatics. 2006. PMID: 16820429

8

Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities.

Sanguinetti G, Lawrence ND, Rattray M. Sanguinetti G, et al. Among authors: rattray m. Bioinformatics. 2006 Nov 15;22(22):2775-81. doi: 10.1093/bioinformatics/btl473. Epub 2006 Sep 11. Bioinformatics. 2006. PMID: 16966362

9

Including probe-level uncertainty in model-based gene expression clustering.

Liu X, Lin KK, Andersen B, Rattray M. Liu X, et al. Among authors: rattray m. BMC Bioinformatics. 2007 Mar 21;8:98. doi: 10.1186/1471-2105-8-98. BMC Bioinformatics. 2007. PMID: 17376221 Free PMC article.

10

A comparison of microarray and MPSS technology platforms for expression analysis of Arabidopsis.

Chen J, Agrawal V, Rattray M, West MA, St Clair DA, Michelmore RW, Coughlan SJ, Meyers BC. Chen J, et al. Among authors: rattray m. BMC Genomics. 2007 Nov 12;8:414. doi: 10.1186/1471-2164-8-414. BMC Genomics. 2007. PMID: 17997849 Free PMC article.

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