Roth FP - Search Results

1

Mammalian ultraconserved elements are strongly depleted among segmental duplications and copy number variants.

Derti A, Roth FP, Church GM, Wu CT. Derti A, et al. Among authors: roth fp. Nat Genet. 2006 Oct;38(10):1216-20. doi: 10.1038/ng1888. Epub 2006 Sep 24. Nat Genet. 2006. PMID: 16998490

2

Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.

Grad YH, Roth FP, Halfon MS, Church GM. Grad YH, et al. Among authors: roth fp. Bioinformatics. 2004 Nov 1;20(16):2738-50. doi: 10.1093/bioinformatics/bth320. Epub 2004 May 14. Bioinformatics. 2004. PMID: 15145800

3

Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing.

Salehi-Ashtiani K, Yang X, Derti A, Tian W, Hao T, Lin C, Makowski K, Shen L, Murray RR, Szeto D, Tusneem N, Smith DR, Cusick ME, Hill DE, Roth FP, Vidal M. Salehi-Ashtiani K, et al. Among authors: roth fp. Nat Methods. 2008 Jul;5(7):597-600. doi: 10.1038/nmeth.1224. Epub 2008 Jun 15. Nat Methods. 2008. PMID: 18552854 Free PMC article.

4

Genome-wide functional analysis of human 5' untranslated region introns.

Cenik C, Derti A, Mellor JC, Berriz GF, Roth FP. Cenik C, et al. Among authors: roth fp. Genome Biol. 2010;11(3):R29. doi: 10.1186/gb-2010-11-3-r29. Epub 2010 Mar 11. Genome Biol. 2010. PMID: 20222956 Free PMC article.

5

Absence of evidence for MHC-dependent mate selection within HapMap populations.

Derti A, Cenik C, Kraft P, Roth FP. Derti A, et al. Among authors: roth fp. PLoS Genet. 2010 Apr 29;6(4):e1000925. doi: 10.1371/journal.pgen.1000925. PLoS Genet. 2010. PMID: 20442868 Free PMC article.

6

Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation.

Roth FP, Hughes JD, Estep PW, Church GM. Roth FP, et al. Nat Biotechnol. 1998 Oct;16(10):939-45. doi: 10.1038/nbt1098-939. Nat Biotechnol. 1998. PMID: 9788350

7

Predicting phenotype from patterns of annotation.

King OD, Lee JC, Dudley AM, Janse DM, Church GM, Roth FP. King OD, et al. Among authors: roth fp. Bioinformatics. 2003;19 Suppl 1:i183-9. doi: 10.1093/bioinformatics/btg1024. Bioinformatics. 2003. PMID: 12855456

8

Genome analysis reveals interplay between 5'UTR introns and nuclear mRNA export for secretory and mitochondrial genes.

Cenik C, Chua HN, Zhang H, Tarnawsky SP, Akef A, Derti A, Tasan M, Moore MJ, Palazzo AF, Roth FP. Cenik C, et al. Among authors: roth fp. PLoS Genet. 2011 Apr;7(4):e1001366. doi: 10.1371/journal.pgen.1001366. Epub 2011 Apr 14. PLoS Genet. 2011. PMID: 21533221 Free PMC article.

9

Response to "MHC-dependent mate choice in humans: Why genomic patterns from the HapMap European American data set support the hypothesis". HapMap genotypes do not confidently support a role for the MHC locus in human mate selection.

Derti A, Roth FP. Derti A, et al. Among authors: roth fp. Bioessays. 2012 Jul;34(7):576-7. doi: 10.1002/bies.201200023. Epub 2012 Mar 29. Bioessays. 2012. PMID: 22467222 Free PMC article.

10

Transcriptional compensation for gene loss plays a minor role in maintaining genetic robustness in Saccharomyces cerevisiae.

Wong SL, Roth FP. Wong SL, et al. Among authors: roth fp. Genetics. 2005 Oct;171(2):829-33. doi: 10.1534/genetics.105.046060. Epub 2005 Jul 5. Genetics. 2005. PMID: 15998714 Free PMC article.

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